SMTL ID : 6m44.1

355 bp di-nucleosome harboring cohesive DNA termini (high cryoprotectant)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.81 Å

Oligo State

hetero-4-4-4-4-mer

Ligands

4 x CA: CALCIUM ION(Non-covalent)(Non-functional Binders)

CA.1: 2 residues within 4Å: Chain E: D.82 Chain I: C.241 1 PLIP interactions: 1 interactions with chain E Metal complexes: E:D.82 CA.2: 1 residues within 4Å: Chain G: E.92 1 PLIP interactions: 1 interactions with chain G Metal complexes: G:E.92 CA.3: 1 residues within 4Å: Chain I: G.136 No protein-ligand interaction detected (PLIP) CA.4: 1 residues within 4Å: Chain J: T.235 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Adhireksan, Z. et al., Near-atomic resolution structures of interdigitated nucleosome fibres. Nat Commun (2020)

Release Date

2020-10-07

Peptides

Histone H3.1: AEKO
Histone H4: BFLP
Histone H2A type 1-B/E: CGMQ
Histone H2B type 1-J: DHNR

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

E
E

K
K

O
O

B
B

F
F

L
L

P
P

C
C

G
G

M
M

Q
Q

D
D

H
H

N
N

R
R

Histone H3.1

Histone H4

Histone H2A type 1-B/E

Histone H2B type 1-J

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