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SMTL ID : 7q7b.1

Room temperature structure of RNase A at atmospheric pressure in a sapphire capillary after high helium gas pressure release

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.78 Å

Oligo State

monomer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1:	6 residues within 4Å: Chain A: F.8, Q.11, H.12, K.41, H.119, F.120 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:V.118, A:F.120, A:F.120 Water bridges: A:H.12, A:H.12 Salt bridges: A:H.12, A:K.41, A:H.119
SO4.2:	3 residues within 4Å: Chain A: T.3, A.4 Ligands: NA.6 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:A.4

3 x CL: CHLORIDE ION(Non-functional Binders)

CL.3:	1 residues within 4Å: Chain A: K.61 Ligand excluded by PLIP
CL.4:	2 residues within 4Å: Chain A: R.10, N.34 Ligand excluded by PLIP
CL.5:	4 residues within 4Å: Chain A: H.12, N.44, T.45, F.120 Ligand excluded by PLIP

1 x NA: SODIUM ION(Non-functional Binders)

NA.6:

4 residues within 4Å:

Chain A: T.3, A.4, A.5
Ligands: SO4.2

2 PLIP interactions:

2 interactions with chain A

Hydrogen bonds: A:A.4, A:A.5

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Lieske, J. et al., Fixed-target high-pressure macromolecular crystallography. To Be Published

Release Date

2022-11-16

Peptides

Ribonuclease pancreatic: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Ribonuclease pancreatic

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