SMTL ID : 8qar.1

Crystal Structure of the first bromodomain of BRD4 in complex with acetyl-pyrrole derivative compound 98

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x GI0: 3-methyl-1-[2-[4-[(4-methyl-1~{H}-pyrazol-3-yl)methyl]piperazin-1-yl]-1,3-thiazol-4-yl]-2,5,6,7-tetrahydroisoindol-4-one

GI0.1: 14 residues within 4Å: Chain A: W.40, P.41, F.42, Q.43, Q.44, V.46, L.51, L.53, Y.56, C.95, Y.98, N.99, I.105 Ligands: EDO.2 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:F.42, A:V.46, A:L.51, A:L.53 Hydrogen bonds: A:P.41, A:Q.43, A:N.99

2 x EDO: 1,2-ETHANEDIOL

EDO.2: 4 residues within 4Å: Chain A: D.103, D.104, I.105 Ligands: GI0.1 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.103, A:D.104, A:D.104, A:I.105 EDO.3: 8 residues within 4Å: Chain A: I.59, I.60, K.61, T.62, T.90, T.93, N.94, I.97 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:I.59, A:K.61, A:T.62, A:T.62

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cazzanelli, G. et al., Dual BET/BRPF1 inhibitors induce morphological alteration and cellular death in various human cancer cell lines. To be published

Release Date

2024-09-11

Peptides

Bromodomain-containing protein 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain-containing protein 4

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