SMTL ID : 8rsa.1

CRYSTAL STRUCTURE OF TWO COVALENT NUCLEOSIDE DERIVATIVES OF RIBONUCLEASE A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

2 x ADT: 3'-DEOXY-3'-ACETAMIDO-THYMIDINE(Covalent)

ADT.1: 9 residues within 4Å: Chain A: Q.11, H.12, C.65, K.66, N.67, A.109, H.119, F.120, D.121 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:H.119 Hydrogen bonds: A:N.67, A:F.120, A:D.121, A:D.121 Water bridges: A:K.7, A:H.119 ADT.2: 8 residues within 4Å: Chain B: Q.11, H.12, C.65, N.67, A.109, H.119, F.120, D.121 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:H.119 Hydrogen bonds: B:N.67, B:F.120, B:D.121, B:D.121 Water bridges: B:H.119

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nachman, J. et al., Crystal structure of two covalent nucleoside derivatives of ribonuclease A. Biochemistry (1990)

Release Date

1991-04-15

Peptides

RIBONUCLEASE A: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

RIBONUCLEASE A

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