- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.81 Å
- Oligo State
- hetero-1-1-1-mer
- Ligands
- 4 x BCL: BACTERIOCHLOROPHYLL A(Non-covalent)
- 2 x BPH: BACTERIOPHEOPHYTIN A(Non-covalent)
BPH.2: 25 residues within 4Å:- Chain B: F.41, A.42, I.49, A.93, A.96, F.97, W.100, E.104, I.117, A.120, F.121, A.124, Y.148, G.149, I.150, H.153, V.241
- Chain C: X.209, A.212, L.213, M.217, T.254, M.255
- Ligands: BCL.1, BCL.4
11 PLIP interactions:10 interactions with chain B, 1 interactions with chain C- Hydrophobic interactions: B:I.49, B:W.100, B:A.120, B:F.121, B:F.121, B:F.121, B:Y.148, B:V.241, B:V.241, C:A.212
- Hydrogen bonds: B:E.104
BPH.11: 24 residues within 4Å:- Chain B: F.181, A.184, L.185, A.188, L.189, L.219, V.220
- Chain C: S.58, L.59, G.62, L.63, F.66, A.124, V.125, W.128, T.132, T.145, A.148, F.149, A.152, A.272, T.276
- Ligands: BCL.6, BCL.14
12 PLIP interactions:10 interactions with chain C, 2 interactions with chain B- Hydrophobic interactions: C:L.63, C:F.66, C:W.128, C:W.128, C:F.149, C:F.149, C:F.149, C:F.149, C:A.152, C:T.276, B:F.181, B:A.184
- 1 x U10: UBIQUINONE-10(Non-covalent)
- 1 x CL: CHLORIDE ION(Non-functional Binders)
- 3 x LDA: LAURYL DIMETHYLAMINE-N-OXIDE(Non-covalent)
LDA.7: 5 residues within 4Å:- Chain A: W.21
- Chain C: P.199, L.203, W.267
- Ligands: BCL.1
1 PLIP interactions:1 interactions with chain C- Hydrophobic interactions: C:W.267
LDA.8: 2 residues within 4Å:- Chain C: F.6, W.40
3 PLIP interactions:3 interactions with chain C- Hydrophobic interactions: C:W.40
- pi-Cation interactions: C:W.40, C:W.40
LDA.9: 7 residues within 4Å:- Chain B: V.220, G.221
- Chain C: S.29, G.30, V.31, G.32
- Ligands: U10.3
No protein-ligand interaction detected (PLIP)- 1 x FE: FE (III) ION(Non-covalent)
- 1 x SPO: SPHEROIDENE(Non-covalent)
SPO.12: 21 residues within 4Å:- Chain C: F.66, I.69, G.70, F.73, W.74, F.84, W.114, S.118, F.119, M.121, W.156, L.159, G.160, F.161, W.170, V.174, Y.176, G.177, I.178, H.181
- Ligands: BCL.14
13 PLIP interactions:13 interactions with chain C- Hydrophobic interactions: C:F.66, C:F.66, C:I.69, C:F.73, C:F.84, C:W.114, C:W.156, C:L.159, C:F.161, C:W.170, C:V.174, C:Y.176, C:I.178
- 1 x CDL: CARDIOLIPIN(Non-covalent)
CDL.13: 14 residues within 4Å:- Chain A: A.16, S.19, L.27, Y.30
- Chain B: N.199, P.200
- Chain C: G.142, K.143, H.144, W.147, R.266, I.269, W.270, L.277
13 PLIP interactions:10 interactions with chain C, 1 interactions with chain B, 2 interactions with chain A- Hydrophobic interactions: C:W.147, C:W.147, C:I.269, C:W.270, C:L.277, A:L.27, A:Y.30
- Hydrogen bonds: C:K.143, B:N.199
- Salt bridges: C:H.144, C:H.144, C:H.144, C:R.266
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Mathews, I. et al., Crystal structure of R. sphaeroides Photosynthetic Reaction Center variant Y(M210)2-cyanophenylalanine. To Be Published
- Release Date
- 2024-03-13
- Peptides
- Reaction center protein H chain: A
Reaction center protein L chain: B
Reaction center protein M chain: C - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
HB
LC
M - Membrane
-
We predict this structure to be a membrane protein.
SMTL ID : 8vtj.1
Crystal structure of R. sphaeroides Photosynthetic Reaction Center variant Y(M210)2-cyanophenylalanine
Reaction center protein H chain
Reaction center protein L chain
Reaction center protein M chain
Related Entries With Identical Sequence
1aig.1 | 1aig.2 | 1aij.1 | 1aij.2 | 1ds8.1 | 1ds8.2 | 1dv3.1 | 1dv3.2 | 1dv6.1 | 1dv6.2 | 1e14.1 | 1e6d.1 | 1f6n.1 | 1fnp.1 | 1fnq.1 | 1jgw.1 | 1jgx.1 | 1jgy.1 | 1jgz.1 | 1jh0.1 | 1k6l.1 | 1k6n.1 | 1kby.1 | 1l9b.1 | 1l9j.1 | 1l9j.2 | 1m3x.1 | 1mps.1 | 1ogv.1 | 1pcr.1 more...less...1qov.1 | 1rg5.1 | 1rgn.1 | 1rqk.1 | 1ry5.1 | 1rzh.1 | 1rzz.1 | 1rzz.2 | 1s00.1 | 1s00.2 | 1umx.1 | 1yf6.1 | 1yst.1 | 1z9j.1 | 1z9k.1 | 1z9k.2 | 2bnp.1 | 2bns.1 | 2boz.1 | 2gmr.1 | 2gnu.1 | 2hg3.1 | 2hg9.1 | 2hh1.1 | 2hhk.1 | 2hit.1 | 2hj6.1 | 2j8c.1 | 2j8d.1 | 2jiy.1 | 2jj0.1 | 2rcr.1 | 2uws.1 | 2uwt.1 | 2uwu.1 | 2uwv.1 | 2uww.1 | 2ux3.1 | 2ux4.1 | 2ux5.1 | 2uxj.1 | 2uxk.1 | 2uxl.1 | 2uxm.1 | 2wx5.1 | 3dsy.1 | 3dta.1 | 3dtr.1 | 3dts.1 | 3du2.1 | 3du3.1 | 3duq.1 | 3i4d.1 | 3zum.1 | 3zuw.1 | 4h99.1 | 4h9l.1 | 4hbh.1 | 4hbj.1 | 4in6.1 | 4lwy.1 | 4n7k.1 | 4n7l.1 | 4rcr.1 | 4tqq.1 | 4v9g.30 | 4v9g.62 | 5lri.1 | 5lse.1 | 7pil.1 | 7pqd.30 | 7pqd.65 | 7va9.3 | 7va9.35 | 7vb9.1 | 7vnm.1 | 7vny.1 | 7vor.3 | 7vor.36 | 7vot.3 | 7vot.36 | 7voy.1 | 8vtk.1 | 8vtl.1 | 8vtm.1 | 8vtn.1 | 8vto.1