SMTL ID : 9mib.1

206-9C09 Fab in complex with HIV-1 GT1.1 v4.1 SOSIP Env trimer and RM20A3 Fab

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY 2.80 Å
Oligo State
hetero-3-3-3-3-3-3-mer
Ligands
18 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
9 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
3 x NAG- NAG- BMA- MAN- MAN- MAN: alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
15 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Caniels, T.G. et al., Precise targeting of HIV broadly neutralizing antibody precursors in humans. Science (2025)
Release Date
2025-05-21
Peptides
RM20A3 heavy chain Fv: AGM
RM20A3 light chain Fv: BHN
GT1.1 v4.1 SOSIP gp120: CIO
Envelope glycoprotein gp160: DJP
206-9C09 heavy chain Fv: EKQ
206-9C09 kappa chain Fv: FLR
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
G
G
J
M
O
B
I
H
M
N
Q
C
A
I
C
O
E
D
B
J
D
P
F
E
H
K
K
Q
P
F
L
L
N
R
R

RM20A3 heavy chain Fv

Toggle Identical (AGM)

RM20A3 light chain Fv

Toggle Identical (BHN)

GT1.1 v4.1 SOSIP gp120

Toggle Identical (CIO)

Envelope glycoprotein gp160

Toggle Identical (DJP)

206-9C09 heavy chain Fv

Toggle Identical (EKQ)

206-9C09 kappa chain Fv

Toggle Identical (FLR)

Related Entries With Identical Sequence

4tvp.1 | 4zmj.1 | 5aco.1 | 5c7k.1 | 5cez.2 | 5cjx.1 | 5fyl.1 | 5t3x.1 | 5t3z.1 | 5thr.1 | 5u7m.1 | 5u7o.1 | 5utf.1 | 5uty.1 | 5v7j.1 | 5v8l.1 | 5v8m.1 | 5viy.1 | 5vj6.1 | 5w6d.1 | 6cm3.1 | 6crq.1 | 6de7.1 | 6did.1 | 6mn7.1 | 6mtj.1 | 6mtn.1 | 6mu6.1 | 6mu7.1 | 6mu8.1  more...