SMTL ID : 9mii.1

253-7A03 Fab in complex with HIV-1 BG505 SOSIP Env trimer and RM20A3 Fab

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY 3.30 Å
Oligo State
hetero-3-3-3-3-1-1-mer
Ligands
5 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
1 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
1 x NAG- NAG- BMA- MAN: alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
1 x NAG- NAG- BMA- MAN- MAN: alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
44 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Caniels, T.G. et al., Precise targeting of HIV broadly neutralizing antibody precursors in humans. Science (2025)
Release Date
2025-05-21
Peptides
HIV-1 Envelope Glycoprotein BG505 SOSIP.664 gp120: AEI
Envelope glycoprotein gp160: BFJ
RM20A3 heavy chain Fv: CGK
RM20A3 light chain Fv: DHL
253-7A03 heavy chain Fv: M
253-7A03 lambda chain Fv: N
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
E
C
I
E
B
B
F
D
J
F
C
G
G
J
K
M
D
I
H
K
L
N
M
H
N
L

HIV-1 Envelope Glycoprotein BG505 SOSIP.664 gp120

Envelope glycoprotein gp160

Toggle Identical (BJ)

RM20A3 heavy chain Fv

Toggle Identical (CGK)

RM20A3 light chain Fv

Toggle Identical (DHL)

253-7A03 heavy chain Fv

253-7A03 lambda chain Fv

Related Entries With Identical Sequence

4tvp.1 | 4zmj.1 | 5aco.1 | 5c7k.1 | 5cez.2 | 5cjx.1 | 5fyl.1 | 5t3x.1 | 5t3z.1 | 5thr.1 | 5u7m.1 | 5u7o.1 | 5utf.1 | 5uty.1 | 5v7j.1 | 5v8l.1 | 5v8m.1 | 5viy.1 | 5vj6.1 | 5w6d.1 | 6cm3.1 | 6crq.1 | 6de7.1 | 6did.1 | 6mn7.1 | 6mtj.1 | 6mtn.1 | 6mu6.1 | 6mu7.1 | 6mu8.1  more...