A0A2J8MCJ9 (A0A2J8MCJ9_PANTR) Pan troglodytes (Chimpanzee)

UBC isoform 4 UniProtKBInterProInteractive Modelling

685 aa; Sequence (Fasta) ; 2 identical sequences: Homo sapiens: P0CG48; Bos mutus: L8IDB8

Available Structures

291 Experimental Structures

DescriptionPDB IDOligo-stateRangeSeq id (%)Ligands
K48-linked ubiquitin chain formation with a cullin-RING E3 ligase and Cdc34: NEDD8-CUL2-RBX1-ELOB/C… Heteromer
P0CG48; P62877; Q13617; Q15369; Q15370; Q712K3; Q96JP0; Q9H173;
1-685
98.61SY8;ZN;
Crystal structure of HOIL-1L(195-423) in complex with the linear tetra-ubiquitin Heteromer
P0CG48; Q9BYM8;
381-684
100ZN;
Crystal structure of Optineurin UBAN in complex with linear ubiquitin Heteromer
P0CG48; Q96CV9;
381-682
100
The structure of the A20-binding inhibitor of NF-kB 1 in complex with tetra-ubiquitin Heteromer
P0CG48; Q15025;
381-679
100
The structure of the A20-binding inhibitor of NF-kB 1 in complex with tri-ubiquitin Heteromer
P0CG48; Q15025;
457-680
100
TNIP2-Ub complex, C2 form Heteromer
P0CG48; Q8NFZ5;
457-679
100
The N4BP1 CUE-like domain in complex with linear di-Ubiquitin Heteromer
O75113; P0CG48;
533-684
100GOL;
The structure of the A20-Binding Inhibitor of NF-kB 1 in complex with di-ubiquitin Heteromer
P0CG48; Q15025;
533-684
100
Crystal Structure of the UbArk2C-UbcH5b~Ub complex Heteromer
P0CG48; P62837; Q6ZSG1;
533-684
100.0ZN;
Crystal structure of the mouse HOIL1-L-NZF in complex with linear di-ubiquitin Heteromer
P0CG48; Q9WUB0;
533-683
100ZN;
Crystal structure of the mouse HOIL1-L-NZF in complex with linear di-ubiquitin Heteromer
P0CG48; Q9WUB0;
533-683
100TAM;ZN;
Crystal structure of OPTN and linear diubiquitin complex Heteromer
P0CG48; Q8K3K8;
533-683
100
Crystal structure of ABIN-1 UBAN in complex with two M1-linked di-ubiquitins Heteromer
P0CG48; Q9WUU8;
533-682
100
Structure of Deubiquitinase Heteromer
B9G207; P0CG48;
533-682
99.33
Crystal structure of NEMO CoZi in complex with HOIP NZF1 and linear diubiquitin Heteromer
P0CG48; Q96EP0; Q9Y6K9;
533-682
100ZN;
Gumby/Fam105B in complex with linear di-ubiquitin Heteromer
P0CG48; Q96BN8;
533-681
100
Crystal structure of CYLD USP domain (C596S E674Q) in complex with Met1-linked diubiquitin Heteromer
E7FEV5; P0CG48;
533-680
100
Crystal structure of CYLD USP domain (C596S) in complex with Met1-linked diubiquitin Heteromer
E7FEV5; P0CG48;
533-680
100
NEMO CoZi domain in complex with diubiquitin in C2 space group Heteromer
O88522; P0CG48;
533-680
100
NEMO CoZi domain incomplex with diubiquitin in P212121 space group Heteromer
O88522; P0CG48;
533-680
100
Crystal structure of a linear-specific Ubiquitin fab bound to linear ubiquitin Heteromer
P0CG48;
533-679
100
Crystal structure of OTULIN OTU domain (C129A) in complex with Met1- di ubiquitin Heteromer
P0CG48; Q96BN8;
533-678
100SO4;
Structure of OTULIN bound to the Met1-linked diubiquitin activity probe Heteromer
P0CG48; Q96BN8;
533-678
99.31
Crystal structure of Schizosaccharomyces pombe sst2 catalytic domain and Ubiquitin Heteromer
P0CG48; Q9P371;
608-684
98.7ZN;CL;EDO;
Crystal Structure of USP2 in complex with mutated ubiquitin Heteromer
O75604; P0CG48;
606-682
94.81CL;GOL;ZN;
Crystal Structure of USP2 and a mutant form of Ubiquitin Heteromer
O75604; P0CG48;
606-682
94.81ZN;CL;GOL;
Rnf4 - ubch5a - ubiquitin heterotrimeric complex Heteromer
O88846; P0CG48; P51668;
608-684
100ZN;
Complex of human TRIM2 RING domain, UBCH5C, and Ubiquitin Heteromer
P0CG48; P61077; Q9C040;
608-684
100GOL;ZN;PE8;
Structure of TRIM2 RING domain in complex with UBE2D1~Ub conjugate Heteromer
P0CG48; P51668; Q9C040;
608-684
100ZN;
TDP2 UBA Domain Bound to Ubiquitin at 0.85 Angstroms Resolution, Crystal Form 1 Heteromer
O95551; P0CG48;
609-684
100K;
The crystal structure of Papain-Like Protease of SARS CoV-2, C111S/D286N mutant, in complex with a … Heteromer
P0CG47; P0CG48; P0DTD1;
609-684
100ZN;EDO;
RNF38-UB-UbcH5B-Ub complex Heteromer
P0CG48; P62837; Q9H0F5;
609-684
100EDO;ZN;
Crystal structure of A20 ZF7 in complex with linear ubiquitin, form II Heteromer
P0CG48; P21580;
609-684
100EDO;ZN;K;
Crystal structure of Legionella effector sdeD (lpg2509) in complex with Ubiquitin Heteromer
P0CG48; Q5ZSK8;
609-684
100
Structure of CYLD CAP-Gly3 (467-552) bound to Ub; tetragonal space group Heteromer
P0CG48; Q9NQC7;
609-684
100
Crystal structure of Schizosaccharomyces pombe AMSH-like protease sst2 E286A mutant bound to ubiqui… Heteromer
P0CG48; Q9P371;
609-684
100ZN;EDO;PO4;
HOIL-1 RING2 domain bound to ubiquitin-maltose (maltose not modelled) Heteromer
P0CG48; Q9BYM8;
609-684
100ZN;CL;SO4;
Crystal structure of Legionella effector sdeD (lpg2509) H67A in complex with ADP-ribosylated Ubiqui… Heteromer
P0CG48; Q5ZSK8;
609-684
100AR6;
Structure of G75Q Ubiquitin bound to KLHDC3-EloB/C Heteromer
P0CG48; Q15369; Q15370; Q9BQ90;
609-684
98.68MPD;
Structure of the SAGA Ubp8/Sgf11/Sus1/Sgf73 DUB module bound to ubiquitin aldehyde Heteromer
P0CG48; P50102; P53165; Q03067; Q6WNK7;
609-684
100EDO;GOL;ZN;
The structure of h/ceOTUB1-ubiquitin aldehyde-UBCH5B~Ub Heteromer
P0CG48; P62837; Q96FW1; Q9XVR6;
609-684
100EDO;MG;
The catalytic domain of human deubiquitinase DUBA in complex with ubiquitin aldehyde Heteromer
P0CG48; Q96G74;
609-684
100
Crystal structure of Schizosaccharomyces pombe AMSH-like protease sst2 catalytic domain bound to ub… Heteromer
P0CG48; Q9P371;
609-684
100ZN;EDO;
Structure of MavC in complex with its substrate in R3 spacegroup Heteromer
P0CG48; P61088; Q5ZTL4;
609-684
98.68
Crystal structure of A20 ZF7 in complex with linear tetraubiquitin Heteromer
P0CG48; P21580;
609-684
100ZN;K;
Co-crystal structure of znf ubp domain from the deubiquitinating enzyme isopeptidase T (isot) in co… Heteromer
P0CG48; P45974;
609-684
100ZN;CL;
HOIL-1 RING2 domain bound to ubiquitin Heteromer
P0CG48; Q9BYM8;
609-684
100ZN;CL;SO4;
RNF38-UbcH5B-UB complex Heteromer
P0CG48; P62837; Q9H0F5;
609-684
100CL;EDO;ZN;
UCHL3 in complex with synthetic, K27-linked diubiquitin Heteromer
P0CG47; P0CG48; P15374;
609-684
100K;BR;EDO;CL;
SAGA DUB module Ubp8(C146A)/Sgf11/Sus1/Sgf73 bound to monoubiquitin Heteromer
P0CG48; P50102; P53165; Q03067; Q6WNK7;
609-684
100ZN;
Crystal structure of Mindy1 in complex with Lys48 linked di-ubiquitin Heteromer
P0CG48; Q8N5J2;
609-684
100SO4;
Structure of BIRC7-UbcH5b-Ub complex. Heteromer
P0CG48; P62837; Q96CA5;
609-684
100ZN;
Crystal structure of Cat MDM2-S429E RING domain bound to UbcH5B-Ub Heteromer
P0CG48; P62837; P62979; Q7YRZ8;
609-684
10012×EDO;ZN;NO3;
Crystal structure of Mindy1 mutant (P138A) in complex with Lys48 linked di-ubiquitin Heteromer
P0CG48; Q8N5J2;
609-684
100NA;CL;
Crystal structure of the Orientia tsutsugamushi OtDUB in complex with three molecules of ubiquitin Heteromer
B3CVM3; P0CG48;
609-684
100
Crystal structure of monoubiquitinated TRIM21 RING (Ub-RING) In complex with ubiquitin charged Ube2… Heteromer
P0CG47; P0CG48; P19474; P61088; Q15819;
609-684
100ZN;
UbcH5b~Ubiquitin Conjugate Heteromer
P0CG48; P62837;
609-684
100GOL;
Structure of phosphoTyr363-Cbl-b - UbcH5B-Ub - ZAP-70 peptide complex Heteromer
P0CG48; P43403; P62837; Q13191;
609-684
100ZN;CA;EDO;
Structure of Dup1 mutant H67A:Ubiquitin complex Heteromer
A0A3A6VNK6; P0CG48;
609-684
100
A complex of RNF4-RING domain, Ubc13-Ub (isopeptide crosslink) Heteromer
O88846; P0CG48; P61088;
609-684
100ZN;EDO;
Crystal structure of phosphorylated RBR E3 ligase RNF216 in complex with K63-linked di-ubiquitin Heteromer
P0CG48; Q9NWF9;
609-684
100ZN;SO4;GOL;PG0;
STRUCTURAL BASIS FOR THE SPECIFICITY OF UBIQUITIN C-TERMINAL HYDROLASES Heteromer
P0CG48; P35127;
609-684
100
Crystal structure of a UBP-family deubiquitinating enzyme in isolation and in complex with ubiquiti… Heteromer
P0CG48; Q93009;
609-684
100
Crystal structure of MavC in complex with its substrate mimic in C222(1) space group Heteromer
P0CG48; P61088; Q5ZTL4;
609-684
98.68
Structure of OTUD2 OTU domain in complex with Ubiquitin K11-linked peptide Heteromer
P0CG48; Q5VVQ6;
609-684
100NO3;MG;
UbcH5c~Ubiquitin Conjugate Heteromer
P0CG48; P61077;
609-684
100GOL;
The structure of a ceOTUB1 ubiquitin aldehyde UBC13~Ub complex Heteromer
P0CG48; P61088; Q9XVR6;
609-684
100
Crystal structure of RBR E3 ligase RNF216 with ubiquitin Heteromer
P0CG48; Q9NWF9;
609-684
100ZN;GOL;
SidE-Ubi Heteromer
P0CG48; Q6BBR6;
609-684
98.68
Mms2/Ubc13~Ubiquitin Heteromer
P0CG48; P52490; P53152;
609-684
100
Crystal structure of RBR E3 ligase RNF216 in complex with K63-linked di-ubiquitin Heteromer
P0CG48; Q9NWF9;
609-684
100ZN;SO4;GOL;
Crystal structure of ubiquitin charged Ube2N (Ube2N~Ub) in complex with Ube2V2 Heteromer
P0CG48; P61088; Q15819;
609-684
100
Crystal structure of K63-specific fab Apu.3A8 bound to K63-linked di-ubiquitin Heteromer
P0CG48; Q6PIL8;
609-684
100
Structure of G75R Ubiquitin bound to KLHDC3-EloB/C Heteromer
P0CG48; Q15369; Q15370; Q9BQ90;
609-684
98.68GOL;
SdeA DUB Domain in complex with Ubiquitin Heteromer
P0CG48; Q5ZTK4;
609-684
100
Crystal structure of Mindy2 (C266A) in complex with Lys48 linked di-ubiquitin (K48-Ub2) Heteromer
P0CG48; Q8NBR6;
609-684
100K;PG4;
Crystal structure of mouse NEMO CoZi in complex with Lys63-linked di-ubiquitin Heteromer
O88522; P0CG48;
609-684
98.68
Structure of Shigella effector OspG in complex with host UbcH5c- Ubiquitin conjugate Heteromer
P0CG48; P61077; Q99PZ6;
609-684
100
Usp21 in complex with a ubiquitin-based, USP21-specific inhibitor Heteromer
P0CG48; Q9UK80;
533-608
96.05ZN;CL;GOL;
Crystal structure of K63-specific fab Apu2.16 bound to K63-linked di-ubiquitin Heteromer
P0CG48; Q6PIL8;
609-684
100
Crystal structure of SARS-CoV papain-like protease PLpro in complex with ubiquitin aldehyde Heteromer
P0C6X7; P0CG48;
609-684
100ZN;
Crystal structure of MavC in complex with substrate mimic in P65 space group Heteromer
P0CG48; P61088; Q5ZTL4;
609-684
98.68
Structure of the first OTU domain from Legionella pneumophila effector protein LotA bound to K6-lin… Heteromer
P0CG48; Q5ZTB4;
609-684
100
Crystal structure of TRIM21 RING domain in complex with an isopeptide-linked Ube2N~ubiquitin conjug… Heteromer
P0CG48; P19474; P61088;
609-684
100ZN;MPD;
Crystal structure of Mindy2 (C266A) in complex with Lys48-linked penta-ubiquitin (K48-Ub5) Heteromer
P0CG48; Q8NBR6;
609-684
100CL;NA;
SidE-Ubi-NAD Heteromer
P0CG48; Q6BBR6;
609-684
98.68NAD;AMP;
Crystal structure of K29-linked di-ubiquitin in complex with synthetic antigen binding fragment Heteromer
P0CG48;
609-684
100PO4;
SidE-Ubi-ADPr Heteromer
P0CG48; Q6BBR6;
609-684
98.68ADP;
RNF216/E2-Ub/Ub transthiolation complex Heteromer
P0CG48; P68036; Q9NWF9;
609-684
100ZN;SO4;
Structure of OTUD2 OTU domain in complex with K11-linked di ubiquitin Heteromer
P0CG48; Q5VVQ6;
609-684
100GOL;
HOIL-1/E2-Ub/Ub transthiolation complex Heteromer
P0CG48; P68036; Q9BYM8;
609-684
100ZN;
E2~Ubiquitin-HECT Heteromer
P0CG48; P62837; Q96PU5;
609-684
100
The structure of h/ceOTUB1-ubiquitin aldehyde-UBC13~Ub Heteromer
P0CG48; P61088; Q96FW1; Q9XVR6;
609-684
100
Crystal structure of human OTUB1/UbcH5b~Ub/Ub Heteromer
P0CG48; P62837; Q96FW1;
609-684
100
E2~Ubiquitin-HECT Heteromer
P0CG48; P62837; Q96PU5;
609-684
100
Structure of Lys33-linked diUb bound to Trabid NZF1 Heteromer
P0CG48; Q9UGI0;
609-684
98.68ZN;
Structure of USP14 bound to ubquitin aldehyde Heteromer
P0CG48; P54578;
609-684
100
Crystal structure of human OTUB1/UbcH5b~Ub/Ub Heteromer
P0CG48; P62837; Q96FW1;
609-684
100
Solution structure of the human Mms2-Ubiquitin complex Heteromer
P0CG48; Q15819;
609-684
98.68
Complex Structures of Mouse Rpn13 (22-130aa) and ubiquitin Heteromer
P0CG48; Q9JKV1;
609-684
100
Solution Structure of the UbcH5c/Ub Non-covalent Complex Heteromer
P0CG48; P61077;
609-684
100
Solution structure of the Josephin domain of Ataxin-3 in complex with ubiquitin molecule. Heteromer
P0CG48; P54252;
609-684
100
gp78CUE domain bound to the distal ubiquitin of K48-linked diubiquitin Heteromer
P0CG48; Q9UKV5;
609-684
100
Solution structure of PLAA family ubiquitin binding domain (PFUC) trans isomer in complex with ubiq… Heteromer
P0CG48; Q9Y263;
609-684
100
The solution structure of the K63-Ub2:tUIMs complex Heteromer
P0CG48; Q96RL1;
609-684
100
Structure of the gp78CUE domain bound to monubiquitin Heteromer
P0CG48; Q9UKV5;
609-684
100
NMR structure of the Rad18-UBZ/ubiquitin complex Heteromer
P0CG48; Q9NS91;
609-684
100ZN;
gp78CUE domain bound to the proximal ubiquitin of K48-linked diubiquitin Heteromer
P0CG48; Q9UKV5;
609-684
100
Structure of the complex of ubiquitin and the ubiquitin-like (UBL) domain of Ddi1 Heteromer
P0CG48; P40087;
609-684
98.68
Solution Structure of S5a UIM-2/Ubiquitin Complex Heteromer
P0CG48; P55036;
609-684
100
Distinct ubiquitin binding modes exhibited by sh3 domains: molecular determinants and functional im… Heteromer
P0CG48; Q9JLQ0;
609-684
100
Solution structure of the complex of ubiquitin and ubiquilin 1 UBA domain Heteromer
P0CG48; Q9UMX0;
609-684
100
Structure of the UBA Domain of Human NBR1 in Complex with Ubiquitin Heteromer
P0CG48; Q14596;
609-684
100
UbcH7-Ub Complex with R0RBR Parkin and phosphoubiquitin Heteromer
O60260; P0CG47; P0CG48; P68036;
609-684
100ZN;
STRUCTURE OF A CONJUGATING ENZYME-UBIQUITIN THIOLESTER COMPLEX Heteromer
P0CG48; P21734;
609-684
100
NMR structure of minor S5a (196-306):K48 linked diubiquitin species Heteromer
P0CG48; P55036;
609-684
100
Distinct ubiquitin binding modes exhibited by SH3 domains: molecular determinants and functional im… Heteromer
P0CG48; Q9JLQ0;
609-684
100
Solution structure of PLAA family ubiquitin binding domain (PFUC) cis isomer in complex with ubiqui… Heteromer
P0CG48; Q9Y263;
609-684
100
Ubiquitin Recognition by Npl4 Zinc-Fingers Heteromer
P0CG48; Q9ES54;
609-684
100ZN;
Solution Structure of the Ubiquitin-Associated Domain of Human BMSC-UbP and its Complex with Ubiqui… Heteromer
P0CG48; Q96S82;
609-684
100
Solution Structure of S5a UIM-1/Ubiquitin Complex Heteromer
P0CG48; P55036;
609-684
100
NMR based structural model of the UBCH8-UBIQUITIN complex Heteromer
O14933; P0CG48;
609-684
98.68
USP1 bound to KSQ-4279 and ubiquitin conjugated to FANCD2 (focused refinement) Heteromer
O94782; P0CG48;
609-684
100ZN;A1IB8;
Catalytic module of human CTLH E3 ligase bound to multiphosphorylated UBE2H~ubiquitin Heteromer
P0CG48; P62256; Q7L5Y9; Q9H871;
609-684
100ZN;
Active state Dot1 bound to the unacetylated H4 nucleosome Heteromer
P02281; P06897; P0CG48; P62799; P84233; Q04089;
609-684
98.68SAM;
C(N)RL4CSA-UVSSA-E2-ubiquitin complex. Heteromer
A0A6P5C4T4; P0CG48; P62877; Q13216; Q13619; Q15843; Q16531; Q2YD98;
609-684
100ZN;
SA-like state of human 26S Proteasome with non-cleavable M1-linked hexaubiquitin and E3 ubiquitin l… Heteromer
A0A087X2I1; O00231; O00232; O00487; O14818; O43242; P0CG48; P17980; P20618; P25786; P25787; P25788; P25789; P28066; P28070; P28072; P28074; P35998; P43686; P48556; P49720; P49721; P51665; P55036; P60896; P60900; P62191; P62195; Q13200; Q15008; Q99436; Q99460; Q9UNM6;
609-684
100ZN;AGS;MG;ADP;
Cryo-EM structure of USP1-UAF1 bound to FANCI and mono-ubiquitinated FANCD2 without ML323 (consensu… Heteromer
O94782; P0CG48; Q8TAF3; Q9BXW9; Q9NVI1;
609-684
100ZN;
CRL4CSA-E2-Ub (state 2) Heteromer
P0CG48; P62837; P62877; Q13216; Q13619; Q15843; Q16531;
609-684
100ZN;
SAGA DUB module bound to a ubiqitinated nucleosome Heteromer
P02281; P06897; P0CG48; P50102; P53165; P62799; P84233; Q03067; Q6WNK7;
609-684
100ZN;
USP1 bound to ML323 and ubiquitin conjugated to FANCD2 (ordered subset, focused refinement) Heteromer
O94782; P0CG48;
609-684
100ZN;JDA;
Cryo-EM structure of USP1-UAF1 bound to FANCI and mono-ubiquitinated FANCD2 with ML323 (consensus r… Heteromer
O94782; P0CG48; Q8TAF3; Q9BXW9; Q9NVI1;
609-684
100ZN;JDA;
PRC2-AEBP2-JARID2 bound to H2AK119ub1 nucleosome Heteromer
O75530; P02281; P06897; P0CG48; P62799; P84233; Q09028; Q15022; Q15910; Q6ZN18; Q92833;
609-684
98.68MG;SAH;ZN;
Structure of yeast Ubr1 in complex with Ubc2 and N-degron Heteromer
P06104; P0CG48; P19812;
609-684
98.68ZN;
Catalytic module of yeast GID E3 ligase bound to multiphosphorylated Ubc8~ubiquitin Heteromer
P0CG48; P28263; P40492; Q12508;
609-684
100ZN;
Structure of monoubiquitinated FANCD2 in complex with FANCI and DNA Heteromer
B0I564; P0CG48; Q68Y81;
609-684
100
Mono-ubiquitinated Fanconi Anemia ID complex bound to ICL DNA Heteromer
P0CG48; Q9BXW9; Q9NVI1;
609-684
100
Structure of mono-ubiquitinated FANCD2 bound to non-ubiquitinated FANCI and to DNA Heteromer
P0CG48; Q9BXW9; Q9NVI1;
609-684
100
Structure of E3 ligase VsHECT bound to ubiquitin Heteromer
A0A2V2RSR1; P0CG48;
609-683
100AYE;
Crystal structure of UCHL3-UbVME complex Heteromer
P0CG48; P15374;
609-683
100MG;GVE;
Equine arteritis virus papain-like protease 2 (PLP2) covalently bound to ubiquitin Heteromer
P0CG48; P19811;
609-683
100ZN;GOL;
Structure of Ovarian Tumor (OTU) domain in complex with Ubiquitin Heteromer
P0CG48; P43558;
609-683
1003CN;
Crystal structure of Trichinella spiralis UCH37 catalytic domain bound to Ubiquitin vinyl methyl es… Heteromer
P0CG48;
609-683
100DTT;NA;GVE;
Viral tegument-like DUBs Heteromer
D6YWY5; P0CG48;
609-683
100CIT;AYE;
Structure of E3 ligase SopA bound to ubiquitin Heteromer
P0CG48; Q8ZNR3;
609-683
100AYE;
RPN13 (19-132)-RPN2 (940-952) pY950-Ub complex Heteromer
P0CG48; Q16186; Q99460;
609-683
100EDO;
The crystal structure of E2-25K and UBB+1 complex Heteromer
P0CG48; P61086;
609-683
100
Crystal structure of the ubiquitin-specific protease encoded by murine cytomegalovirus tegument pro… Heteromer
P0CG48;
609-683
100MG;GVE;PG4;
Crystal structure of an OTU deubiquitinase from Wolbachia pipientis wMel bound to ubiquitin Heteromer
P0CG48; Q73HU7;
609-683
100FLC;
Crystal structure of Trichinella spiralis UCH37 bound to Ubiquitin vinyl methyl ester Heteromer
P0CG48;
609-683
100GVE;
Crystal Structure of Human Otubain2 and Ubiquitin Complex Heteromer
P0CG48; Q96DC9;
609-683
100GOL;NEH;
Maize rayado fino virus protease in complex with Ubiquitin Heteromer
P0CG48; Q91TW9;
609-683
100GOL;3CN;
Crystal Structure of MavC in Complex with Ub-UbE2N Heteromer
P0CG48; P61088; Q5ZTL4;
609-683
100
Crystal structure of an OTU deubiquitinase from Escherichia albertii bound to ubiquitin Heteromer
P0CG48;
609-683
100FMT;
Covalent Ubiquitin-USP2 Complex Heteromer
O75604; P0CG48;
609-683
100ZN;NEH;
Crystal structure of Plasmodium falciparum UCHL3 in complex with the suicide inhibitor UbVME Heteromer
P0CG48; Q8IKM8;
609-683
100CL;
Structure of Ovarian Tumor (OTU) domain in complex with Ubiquitin Heteromer
P0CG48; P43558;
609-683
1003CN;
Crystal structure of the S18Y variant of ubiquitin carboxy terminal hydrolase L1 bound to ubiquitin… Heteromer
P09936; P0CG48;
609-683
100GVE;
Gumby/Fam105B in complex with ubiquitin Heteromer
P0CG48; Q96BN8;
608-682
100SO4;
Structure of a viral OTU domain protease bound to Ubiquitin Heteromer
P0CG48; Q6TQR6;
609-683
100SO4;ACT;4LJ;
Structure of E3 ligase NleL bound to ubiquitin Heteromer
A0A0H3JDV8; P0CG48;
609-683
100AYE;
Structure of Burkholderia pseudomallei deubiquitinase TssM in complex with ubiquitin Heteromer
P0CG48; Q63K53;
609-683
100GOL;AYE;
Cdc34-ubiquitin-CC0651 complex Heteromer
P0CG48; P49427;
608-682
100U94;
Crystal structure of a Josephin-ubiquitin complex: Evolutionary restraints on ataxin-3 deubiquitina… Heteromer
P0CG48; Q9H3M9;
609-683
100NA;
Crystal structure of the I93M mutant of ubiquitin carboxy terminal hydrolase L1 bound to ubiquitin … Heteromer
P09936; P0CG48;
609-683
100GVE;
Covalent Ubiquitin-Usp5 Complex Heteromer
P0CG48; P45974;
609-683
100ZN;NEH;
Crystal structure of ubiquitin carboxy terminal hydrolase L1 bound to ubiquitin vinylmethylester Heteromer
P09936; P0CG48;
609-683
100GVE;
Diversity of ubiquitin and ISG15 specificity amongst nairoviruses viral ovarian tumor domain protea… Heteromer
P0CG48; Q66431;
609-683
1004LJ;SO4;
Structure of SARS PLpro bound to a Lys48-linked di-ubiquitin activity based probe Heteromer
P0C6X7; P0CG47; P0CG48;
609-683
98.67ACT;NI;
Structure of an Rsp5xUbxSna3 complex: Mechanism of ubiquitin ligation and lysine prioritization by … Heteromer
P0CG48; P14359; P39940;
609-683
98.67
X-ray structure of Turnip Yellow Mosaic Virus PRO/DUB in complex with Ubiquitin Heteromer
P0CG48; P10358;
609-683
100GVE;
Structure of an Ubiquitin complex Heteromer
O95786; P0CG48;
609-683
100
CIN85 Sh3-C domain in complex with ubiquitin Heteromer
P0CG48; Q96B97;
609-683
100
Ubiquitin ligation to substrate by a cullin-RING E3 ligase & Cdc34: NEDD8-CUL2-RBX1-ELOB/C-FEM1C wi… Heteromer
P0CG48; P62877; Q13617; Q15369; Q15370; Q712K3; Q96JP0; Q9H173;
1-75
100U9O;ZN;
Yeast COMPASS in complex with a ubiquitinated nucleosome Heteromer
P02281; P06897; P0CG48; P38123; P38827; P39706; P43132; P62799; P84233; Q03012; Q03323;
609-683
100ZN;SAM;
Ubiquitin Ligation to substrate by a cullin-RING E3 ligase at 3.7A resolution: NEDD8-CUL1-RBX1 N98R… Heteromer
H2QLR9; P0CG48; P25963; P62837; P63208; Q13616; Q15843; Q9Y297;
609-683
100ZN;
Ubiquitin ligation to F-box protein substrates by SCF-RBR E3-E3 super-assembly: NEDD8-CUL1-RBX1-SKP… Heteromer
P0CG48; P20248; P24941; P46527; P61024; P62877; P63208; P68036; Q13309; Q13616; Q15843; Q9Y4X5;
609-683
100ZN;SY8;
Ubiquitin ligation to F-box protein substrates by SCF-RBR E3-E3 super-assembly: NEDD8-CUL1-RBX1-UBE… Heteromer
P0CG48; P62877; P68036; Q13616; Q15843; Q9Y4X5;
609-683
100ZN;SY8;
Ubiquitin ligation to neosubstrate by a cullin-RING E3 ligase & Cdc34: NEDD8-CUL2-RBX1-ELOB/C-VHL-M… Heteromer
O60885; P0CG48; P40337; P62877; Q13617; Q15369; Q15370; Q712K3;
609-683
100ZN;SY8;759;
Ubiquitin ligation to F-box protein substrates by SCF-RBR E3-E3 super-assembly: CUL1-RBX1-SKP1-SKP2… Heteromer
P0CG48; P46527; P61024; P62877; P63208; Q13309; Q13616; Q9Y4X5;
609-683
100ZN;
(NEDD8)-CRL2VHL-MZ1-Brd4BD2-Ub(G76S, K48C)-UBE2R1(C93K, S138C, C191S, C223S)-Ub Heteromer
O60885; P0CG48; P40337; P49427; P62877; Q13617; Q15369; Q15370; Q15843;
609-683
100759;ZN;
Active state Dot1 bound to the H4K16ac nucleosome Heteromer
P02281; P06897; P0CG48; P62799; P84233; Q04089;
610-684
98.67SAM;
Active state Dot1L bound to the H2B-Ubiquitinated nucleosome, 1-to-1 complex Heteromer
P02281; P06897; P0CG48; P62799; P84233; Q8TEK3;
609-683
100SAM;
Structure of ubiquitin bound to coiled coil-UIM form 1 Heteromer
P0CG48;
609-682
100A1IDH;
Crystal structure of A20 ZF7 in complex with linear ubiquitin, form I Heteromer
P0CG48; P21580;
609-682
100ZN;K;
PDE-Ubiquitin Heteromer
P0CG48; Q6BBR6;
609-682
100
ANTH domain of CALM (clathrin-assembly lymphoid myeloid leukemia protein) bound to ubiquitin Heteromer
O55012; P0CG48;
609-682
100
The catalytic domain of USP8 in complex with a USP8 specific inhibitor Heteromer
P0CG48; P40818;
533-606
83.78ZN;
MavC-UBE2N-Ub complex Heteromer
P0CG48; P61088; Q5ZTL4;
609-682
100
K33-specific affimer bound to K33 diUb Heteromer
P0CG48;
609-682
100SO4;GOL;
Structure of BARD1 ARD-BRCTs in complex with H2AKc15ub nucleosomes (Map1) Heteromer
M3WD26; P0C0S8; P0CG48; P62805; P62807; P68431;
609-682
100
Structure of ubiquitin bound of coiled-coil UIM form 2 Heteromer
P0CG48;
609-681
100A1IDH;
Ubiquitin binding variants Heteromer
P0CG48; Q9UJX6;
609-681
100
PDE-Ubi-ADPr Heteromer
P0CG48; Q6BBR6;
609-681
100AMP;
Crystal structure of OTUB1 in complex with ubiquitin variant Heteromer
P0CG48; Q96FW1;
609-681
91.78
Crystal structure of human STAM1 VHS domain in complex with ubiquitin Heteromer
P0CG48; Q92783;
609-681
100
Structural basis for ubiquitin recognition by the human EAP45/ESCRT-II GLUE domain Heteromer
P0CG48; Q86VN1;
609-681
100
X-ray structure of the non-covalent complex between UbcH5A and Ubiquitin Heteromer
P0CG48; P51668;
609-681
100
Crystal Structure of a Complex of NOD1 CARD and Ubiquitin Heteromer
P0CG48; Q9Y239;
609-681
100PO4;
Structure of PINK1 bound to ubiquitin Heteromer
E0W1I1; P0CG48;
609-681
97.26GOL;
HHARI/ARIH1-UBCH7~Ubiquitin Heteromer
P0CG48; P68036; Q9Y4X5;
609-681
100ZN;
Crystal structure of the UBA domain of Dsk2 in complex with Ubiquitin Heteromer
P0CG48; P48510;
609-680
100
TSG101(UEV) domain in complex with Ubiquitin Heteromer
P0CG48; Q99816;
609-680
100CU;SO4;
Crystal structure of hRpn13 Pru domain in complex with Ubiquitin and XL44 Heteromer
P0CG48; Q16186;
609-680
100ZTO;
The crystal structure of E2-25K and ubiquitin complex Heteromer
P0CG48; P61086;
609-680
100
CRYSTAL STRUCTURE OF NEDD4 WITH A UB VARIANT Heteromer
P0CG48; P46934;
610-681
88.89
CRYSTAL STRUCTURE OF E3 LIGASE ITCH WITH A UB VARIANT Heteromer
P0CG48; Q96J02;
533-604
85.92
RNF12 RING domain in complex with a Ube2d2~Ub conjugate Heteromer
P0CG48; P62837; Q9NVW2;
609-680
100ZN;IOD;
Crystal structure of the A20 ZnF4, ubiquitin and UbcH5A complex Heteromer
P0CG48; P21580; P51668;
609-680
100ZN;
Cryo-EM structure of human DNMT3A UDR bound to H2AK119ub1-modified nucleosome Heteromer
P02281; P02302; P06897; P0CG48; P62799; Q9Y6K1;
609-680
100.0
RCR E3 ligase E2-Ubiquitin transthiolation intermediate Heteromer
O75592; P0CG48; P61077;
610-680
100ZN;LWZ;
Ubiquitin variant UbV.k.1 in complex with Ube2k Heteromer
P0CG47; P0CG48; P61086;
609-679
100
BAP1/ASXL1 bound to the H2AK119Ub Nucleosome Heteromer
P02281; P06897; P0CG48; P62799; P84233; Q8IXJ9; Q92560;
610-680
100.0
Focused map of Cryo-EM structure of Ubiquitin C-degron bound to KLHDC10-EloB/C Heteromer
P0CG48; Q15369; Q15370; Q6PID8;
681-684
100
Crystal structure of human insulin-degrading enzyme in complex with ubiquitin Heteromer
P0CG48; P14735;
609-611
100ZN;DIO;
CRYSTAL STRUCTURE OF LYS48-LINKED TETRAUBIQUITINhomo-4-mer609-684
100SO4;
Cyclic Lys48-linked tetraubiquitinhomo-4-mer609-684
100SO4;
Crystal structure and solution NMR studies of Lys48-linked tetraubiquitin at neutral pHhomo-4-mer609-684
100SO4;MES;
Crystal structure of K11-linked diubiquitinhomo-4-mer609-684
100EDO;CL;
STRUCTURE OF A NEW CRYSTAL FORM OF TETRAUBIQUITINhomo-4-mer609-684
100
New compact conformation of linear Ub2 structurehomo-2-mer533-681
100
Crystal structure of an open conformation of Lys48-linked diubiquitin at pH 7.5homo-2-mer609-684
100GOL;EPE;
Structure of Lys33-linked diUbhomo-2-mer609-684
98.68GOL;SO4;
Crystal structure of K63-linked di-ubiquitinhomo-2-mer609-684
98.67CD;
crystal structure of Lys63-linked di-ubiquitinhomo-2-mer609-684
100CD;MG;CO;CL;
Crystal structure of wild-type Lys48-linked diubiquitin in an open conformationhomo-2-mer609-684
100
STRUCTURE OF TETRAUBIQUITIN SHOWS HOW MULTIUBIQUITIN CHAINS CAN BE FORMEDhomo-2-mer609-684
100
NMR structure of Lys48-linked di-ubiquitin using chemical shift perturbation data together with RDC…homo-2-mer609-684
100
Ensemble structure of the closed state of Lys63-linked diubiquitin in the absence of a ligandhomo-2-mer609-684
97.37MTN;
Crystal structures of K63-linked di- and tri-ubiquitin reveal a highly extended chain architecturehomo-2-mer609-683
10010×ZN;
NMR Based Structure of the Closed Conformation of LYS48-Linked Di-Ubiquitin Using Experimental Glob…homo-2-mer609-680
100
NMR Based Structure of the Open Conformation of LYS48-Linked Di-UBiquitin Using Experimental Global…homo-2-mer609-680
100
K11-linked Diubiquitin average solution structure at pH 6.8, 0 mM NaClhomo-2-mer609-680
100
K11-linked Diubiquitin average solution structure at pH 6.8, 150 mM NaClhomo-2-mer609-680
100
Solution structure of a dimeric N-terminal fragment of human ubiquitinhomo-2-mer607-659
98.11
crystal structure of linear di-ubiquitinmonomer533-681
100ZN;CL;
Engineering Domain-Swapped Binding Interfaces by Mutually Exclusive Folding: Insertion of Ubiquitin…monomer535-614
10016×SO4;
Automated NMR Structure of the UBB by FAPSYmonomer606-683
97.44
the solution structure of UBB+1, frameshift mutant of ubiquitin Bmonomer606-683
97.44
Backbone Structure of Ubiquitin determined using Backbone amide NOEs and Backbone N-H and N-C RDCsmonomer608-684
100
Synthetic Ubiquitin with fluoro-Leu at 50 and 67monomer609-684
100
C-terminally retracted ubiquitin T66V/L67N mutantmonomer609-684
97.37SO4;
The crystal structure of human Ubiquitin adduct with Zeise's saltmonomer609-684
100PT;
SYNTHETIC STRUCTURAL AND BIOLOGICAL STUDIES OF THE UBIQUITIN SYSTEM. PART 1monomer609-684
100
STRUCTURE OF UBIQUITIN REFINED AT 1.8 ANGSTROMS RESOLUTIONmonomer609-684
100
The Structure and conformation of Lys-63 linked tetra-ubiquitinmonomer609-684
100ZN;
Crystal Structure of the UbArk2C fusion proteinmonomer533-608
100.0GOL;ZN;
Structure of ubiquitin solved by SAD using the Lanthanide-Binding Tagmonomer608-683
98.68TB;
Crystal Structure of cubic Zn3-hUb (human ubiquitin) adductmonomer609-684
100ZN;
The MUMO (minimal under-restraining minimal over-restraining) method for the determination of nativ…monomer609-684
100
SOLUTION STRUCTURE OF THE DESIGNED HYDROPHOBIC CORE MUTANT OF UBIQUITIN, 1D7monomer609-684
90.79
Simultaneous determination of protein structure and dynamicsmonomer609-684
100
A Correspondence Between Solution-State Dynamics of an Individual Protein and the Sequence and Conf…monomer609-684
100
ROTAMER STRAIN AS A DETERMINANT OF PROTEIN STRUCTURAL SPECIFICITYmonomer609-684
89.47
PERE NMR structure of ubiquitinmonomer609-684
100
Proton-Detected 4D DREAM Solid-State NMR Structure of Ubiquitinmonomer609-684
100
UBIQUITIN NMR STRUCTUREmonomer609-684
100
Solid-State NMR Structure of Microcrystalline Ubiquitinmonomer609-684
100
STRUCTURE OF RECOMBINANT HUMAN UBIQUITIN IN AOT REVERSE MICELLESmonomer609-684
100
Solution structure of lysine-free (K0) ubiquitinmonomer609-684
90.79
The pure alternative state of ubiquitinmonomer609-684
98.68
EROS3 RDC and NOE Derived Ubiquitin Ensemblemonomer609-684
100
A tensor-free method for the structural and dynamical refinement of proteins using residual dipolar…monomer609-684
100
C-terminally retracted ubiquitin L67S mutantmonomer609-683
98.67SO4;
Crystal Structure of the 9-10 MoaD Insertion Mutant of Ubiquitinmonomer609-683
100
New strategy to analyze structures of glycopeptide-target complexesmonomer609-683
100TLA;N1L;MAN;M12;
The structure of monodechloro-teicoplanin in complex with its ligand, using ubiquitin as a ligand c…monomer609-683
100GCS;T55;NAG;MAN;
Crystal structure of Zn2-E16V human ubiquitin (hUb) mutant adduct, from a solution 35 mM zinc aceta…monomer609-682
98.65ACT;ZN;
Crystal Structure of ubiquitin P37A/P38Amonomer609-682
97.3ZN;
Observing the overall rocking motion of a protein in a crystal - Cubic Ubiquitin crystals.monomer609-682
100ZN;
Crystal Structure of the 9-10 8 Glycine Insertion Mutant of Ubiquitin.monomer609-681
100
Crystal Structure of the 35-36 8 Glycine Insertion Mutant of Ubiquitinmonomer609-681
100
Crystal Structure of the 35-36 8 Glycine Insertion Mutant of Ubiquitinmonomer609-681
100
Structure of Lys33-linked triUb S.G. P 212121monomer609-681
98.63
X-ray structure of human ubiquitin Cd(II) adductmonomer609-681
100CD;
Crystal structure of Zn1.3-E16V human ubiquitin (hUb) mutant adduct, from a solution 35 mM zinc ace…monomer609-680
98.61ZN;ACT;PEG;
U7Ub25.2540monomer609-680
87.5SO4;
Crystal structure of Zn3-hUb(human ubiquitin) adduct from a solution 70 mM zinc acetate/20% v/v TFE…monomer609-680
100ACT;ZN;
Crystal structure of Zn2.3-hUb (human ubiquitin) adduct from a solution 70 mM zinc acetate/1.3 mM h…monomer609-680
100ZN;ACT;EDO;PEG;
Crystal structure of Zn3-hUb(human ubiquitin) adduct from a solution 100 mM zinc acetate/1.3 mM hUbmonomer609-680
100ZN;ACT;EDO;
Crystal structure of Human Ubiquitin in a new crystal formmonomer609-680
100
X-ray structure of human ubiquitin-Hg(II) adductmonomer609-680
100HG;
Crystal Structure of the 35-36 MoaD Insertion Mutant of Ubiquitinmonomer609-680
100CD;
R1EN(5-227)-ubiquitin fusionmonomer609-680
100ACY;
R1EN(5-225)-ubiquitin fusionmonomer609-680
100ACY;
Crystal structure of Thr66 ADP-ribosylated ubiquitinmonomer609-680
100APR;ZN;MG;
Crystal structure of Zn2.7-E16V human ubiquitin (hUb) mutant adduct, from a solution 100 mM zinc ac…monomer609-679
98.59ZN;ACT;
Crystal structure of a multiple hydrophobic core mutant of ubiquitinmonomer609-679
90.14
Crystal structure of Zn2-hUb (human ubiquitin) adduct from a solution 35 mM zinc acetate/1.3 mM hUbmonomer609-678
100ZN;EDO;
X-ray structure of human ubiquitin Zn(II) adductmonomer609-678
100ZN;
Observing the overall rocking motion of a protein in a crystal.monomer609-678
100ZN;

8 SWISS-MODEL models

TemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
7sbi.1.Amonomer0.74381-530
36.42
8peq.3.Bmonomer0.71457-605
89.26
8peq.1.Bmonomer0.71153-302
88.08
8pf0.1.Amonomer0.71381-530
IMD;86.18
8peq.3.Bmonomer0.71533-681
88.08
8pf0.1.Amonomer0.70153-302
IMD;86.84
8peq.3.Bmonomer0.691-149
88.08
3q3f.1.Amonomer0.52477-614
70.23