L8IDB8 (L8IDB8_9CETA) Bos mutus (wild yak)
Polyubiquitin-C UniProtKBInterProSTRINGInteractive Modelling
It is possible new templates exist for this target since these models were created.
Available Structures
289 Experimental Structures
| Description | PDB ID | Oligo-state | Range | Seq id (%) | Ligands | |
|---|---|---|---|---|---|---|
| K48-linked ubiquitin chain formation with a cullin-RING E3 ligase and Cdc34: NEDD8-CUL2-RBX1-ELOB/C… |
Heteromer P0CG48; P62877; Q13617; Q15369; Q15370; Q712K3; Q96JP0; Q9H173; | 98.61 | 1×SY8; 3×ZN; | |||
| Crystal structure of HOIL-1L(195-423) in complex with the linear tetra-ubiquitin |
Heteromer P0CG48; Q9BYM8; | 100 | 5×ZN; | |||
| Crystal structure of Optineurin UBAN in complex with linear ubiquitin |
Heteromer P0CG48; Q96CV9; | 100 | ||||
| The structure of the A20-binding inhibitor of NF-kB 1 in complex with tetra-ubiquitin |
Heteromer P0CG48; Q15025; | 100 | ||||
| The structure of the A20-binding inhibitor of NF-kB 1 in complex with tri-ubiquitin |
Heteromer P0CG48; Q15025; | 100 | ||||
| TNIP2-Ub complex, C2 form |
Heteromer P0CG48; Q8NFZ5; | 100 | ||||
| The N4BP1 CUE-like domain in complex with linear di-Ubiquitin |
Heteromer O75113; P0CG48; | 100 | 1×GOL; | |||
| The structure of the A20-Binding Inhibitor of NF-kB 1 in complex with di-ubiquitin |
Heteromer P0CG48; Q15025; | 100 | ||||
| Crystal Structure of the UbArk2C-UbcH5b~Ub complex |
Heteromer P0CG48; P62837; Q6ZSG1; | 100.0 | 2×ZN; | |||
| Crystal structure of the mouse HOIL1-L-NZF in complex with linear di-ubiquitin |
Heteromer P0CG48; Q9WUB0; | 100 | 1×ZN; | |||
| Crystal structure of the mouse HOIL1-L-NZF in complex with linear di-ubiquitin |
Heteromer P0CG48; Q9WUB0; | 100 | 1×TAM; 1×ZN; | |||
| Crystal structure of OPTN and linear diubiquitin complex |
Heteromer P0CG48; Q8K3K8; | 100 | ||||
| Crystal structure of ABIN-1 UBAN in complex with two M1-linked di-ubiquitins |
Heteromer P0CG48; Q9WUU8; | 100 | ||||
| Structure of Deubiquitinase |
Heteromer B9G207; P0CG48; | 99.33 | ||||
| Crystal structure of NEMO CoZi in complex with HOIP NZF1 and linear diubiquitin |
Heteromer P0CG48; Q96EP0; Q9Y6K9; | 100 | 1×ZN; | |||
| Gumby/Fam105B in complex with linear di-ubiquitin |
Heteromer P0CG48; Q96BN8; | 100 | ||||
| Crystal structure of CYLD USP domain (C596S E674Q) in complex with Met1-linked diubiquitin |
Heteromer E7FEV5; P0CG48; | 100 | ||||
| Crystal structure of CYLD USP domain (C596S) in complex with Met1-linked diubiquitin |
Heteromer E7FEV5; P0CG48; | 100 | ||||
| NEMO CoZi domain in complex with diubiquitin in C2 space group |
Heteromer O88522; P0CG48; | 100 | ||||
| NEMO CoZi domain incomplex with diubiquitin in P212121 space group |
Heteromer O88522; P0CG48; | 100 | ||||
| Crystal structure of a linear-specific Ubiquitin fab bound to linear ubiquitin |
Heteromer P0CG48; | 100 | ||||
| Crystal structure of OTULIN OTU domain (C129A) in complex with Met1- di ubiquitin |
Heteromer P0CG48; Q96BN8; | 100 | 7×SO4; | |||
| Structure of OTULIN bound to the Met1-linked diubiquitin activity probe |
Heteromer P0CG48; Q96BN8; | 99.31 | ||||
| Crystal structure of Schizosaccharomyces pombe sst2 catalytic domain and Ubiquitin |
Heteromer P0CG48; Q9P371; | 98.7 | 3×ZN; 1×CL; 6×EDO; | |||
| Crystal Structure of USP2 in complex with mutated ubiquitin |
Heteromer O75604; P0CG48; | 94.81 | 2×CL; 1×GOL; 1×ZN; | |||
| Crystal Structure of USP2 and a mutant form of Ubiquitin |
Heteromer O75604; P0CG48; | 94.81 | 1×ZN; 2×CL; 1×GOL; | |||
| Rnf4 - ubch5a - ubiquitin heterotrimeric complex |
Heteromer O88846; P0CG48; P51668; | 100 | 4×ZN; | |||
| Complex of human TRIM2 RING domain, UBCH5C, and Ubiquitin |
Heteromer P0CG48; P61077; Q9C040; | 100 | 9×GOL; 4×ZN; 1×PE8; | |||
| Structure of TRIM2 RING domain in complex with UBE2D1~Ub conjugate |
Heteromer P0CG48; P51668; Q9C040; | 100 | 4×ZN; | |||
| TDP2 UBA Domain Bound to Ubiquitin at 0.85 Angstroms Resolution, Crystal Form 1 |
Heteromer O95551; P0CG48; | 100 | 2×K; | |||
| The crystal structure of Papain-Like Protease of SARS CoV-2, C111S/D286N mutant, in complex with a … |
Heteromer P0CG47; P0CG48; P0DTD1; | 100 | 1×ZN; 4×EDO; | |||
| RNF38-UB-UbcH5B-Ub complex |
Heteromer P0CG48; P62837; Q9H0F5; | 100 | 2×EDO; 2×ZN; | |||
| Crystal structure of A20 ZF7 in complex with linear ubiquitin, form II |
Heteromer P0CG48; P21580; | 100 | 1×EDO; 1×ZN; 1×K; | |||
| Crystal structure of Legionella effector sdeD (lpg2509) in complex with Ubiquitin |
Heteromer P0CG48; Q5ZSK8; | 100 | ||||
| Structure of CYLD CAP-Gly3 (467-552) bound to Ub; tetragonal space group |
Heteromer P0CG48; Q9NQC7; | 100 | ||||
| Crystal structure of Schizosaccharomyces pombe AMSH-like protease sst2 E286A mutant bound to ubiqui… |
Heteromer P0CG48; Q9P371; | 100 | 2×ZN; 4×EDO; 1×PO4; | |||
| Crystal structure of Legionella effector sdeD (lpg2509) H67A in complex with ADP-ribosylated Ubiqui… |
Heteromer P0CG48; Q5ZSK8; | 100 | 1×AR6; | |||
| Structure of G75Q Ubiquitin bound to KLHDC3-EloB/C |
Heteromer P0CG48; Q15369; Q15370; Q9BQ90; | 98.68 | 4×MPD; | |||
| Structure of the SAGA Ubp8/Sgf11/Sus1/Sgf73 DUB module bound to ubiquitin aldehyde |
Heteromer P0CG48; P50102; P53165; Q03067; Q6WNK7; | 100 | 1×EDO; 1×GOL; 8×ZN; | |||
| The structure of h/ceOTUB1-ubiquitin aldehyde-UBCH5B~Ub |
Heteromer P0CG48; P62837; Q96FW1; Q9XVR6; | 100 | 4×EDO; 1×MG; | |||
| The catalytic domain of human deubiquitinase DUBA in complex with ubiquitin aldehyde |
Heteromer P0CG48; Q96G74; | 100 | ||||
| Crystal structure of Schizosaccharomyces pombe AMSH-like protease sst2 catalytic domain bound to ub… |
Heteromer P0CG48; Q9P371; | 100 | 2×ZN; 7×EDO; | |||
| Structure of MavC in complex with its substrate in R3 spacegroup |
Heteromer P0CG48; P61088; Q5ZTL4; | 98.68 | ||||
| Crystal structure of A20 ZF7 in complex with linear tetraubiquitin |
Heteromer P0CG48; P21580; | 100 | 1×ZN; 1×K; | |||
| Co-crystal structure of znf ubp domain from the deubiquitinating enzyme isopeptidase T (isot) in co… |
Heteromer P0CG48; P45974; | 100 | 1×ZN; 1×CL; | |||
| RNF38-UbcH5B-UB complex |
Heteromer P0CG48; P62837; Q9H0F5; | 100 | 3×CL; 2×EDO; 2×ZN; | |||
| UCHL3 in complex with synthetic, K27-linked diubiquitin |
Heteromer P0CG47; P0CG48; P15374; | 100 | 2×K; 3×BR; 9×EDO; 1×CL; | |||
| SAGA DUB module Ubp8(C146A)/Sgf11/Sus1/Sgf73 bound to monoubiquitin |
Heteromer P0CG48; P50102; P53165; Q03067; Q6WNK7; | 100 | 8×ZN; | |||
| Crystal structure of Mindy1 in complex with Lys48 linked di-ubiquitin |
Heteromer P0CG48; Q8N5J2; | 100 | 1×SO4; | |||
| Structure of BIRC7-UbcH5b-Ub complex. |
Heteromer P0CG48; P62837; Q96CA5; | 100 | 4×ZN; | |||
| Crystal structure of Cat MDM2-S429E RING domain bound to UbcH5B-Ub |
Heteromer P0CG48; P62837; P62979; Q7YRZ8; | 100 | 12×EDO; 8×ZN; 3×NO3; | |||
| Crystal structure of Mindy1 mutant (P138A) in complex with Lys48 linked di-ubiquitin |
Heteromer P0CG48; Q8N5J2; | 100 | 4×NA; 2×CL; | |||
| Crystal structure of the Orientia tsutsugamushi OtDUB in complex with three molecules of ubiquitin |
Heteromer B3CVM3; P0CG48; | 100 | ||||
| Crystal structure of monoubiquitinated TRIM21 RING (Ub-RING) In complex with ubiquitin charged Ube2… |
Heteromer P0CG47; P0CG48; P19474; P61088; Q15819; | 100 | 2×ZN; | |||
| UbcH5b~Ubiquitin Conjugate |
Heteromer P0CG48; P62837; | 100 | 2×GOL; | |||
| Structure of phosphoTyr363-Cbl-b - UbcH5B-Ub - ZAP-70 peptide complex |
Heteromer P0CG48; P43403; P62837; Q13191; | 100 | 2×ZN; 1×CA; 1×EDO; | |||
| Structure of Dup1 mutant H67A:Ubiquitin complex |
Heteromer A0A3A6VNK6; P0CG48; | 100 | ||||
| A complex of RNF4-RING domain, Ubc13-Ub (isopeptide crosslink) |
Heteromer O88846; P0CG48; P61088; | 100 | 4×ZN; 6×EDO; | |||
| Crystal structure of phosphorylated RBR E3 ligase RNF216 in complex with K63-linked di-ubiquitin |
Heteromer P0CG48; Q9NWF9; | 100 | 3×ZN; 3×SO4; 3×GOL; 1×PG0; | |||
| STRUCTURAL BASIS FOR THE SPECIFICITY OF UBIQUITIN C-TERMINAL HYDROLASES |
Heteromer P0CG48; P35127; | 100 | ||||
| Crystal structure of a UBP-family deubiquitinating enzyme in isolation and in complex with ubiquiti… |
Heteromer P0CG48; Q93009; | 100 | ||||
| Crystal structure of MavC in complex with its substrate mimic in C222(1) space group |
Heteromer P0CG48; P61088; Q5ZTL4; | 98.68 | ||||
| Structure of OTUD2 OTU domain in complex with Ubiquitin K11-linked peptide |
Heteromer P0CG48; Q5VVQ6; | 100 | 5×NO3; 1×MG; | |||
| UbcH5c~Ubiquitin Conjugate |
Heteromer P0CG48; P61077; | 100 | 4×GOL; | |||
| The structure of a ceOTUB1 ubiquitin aldehyde UBC13~Ub complex |
Heteromer P0CG48; P61088; Q9XVR6; | 100 | ||||
| Crystal structure of RBR E3 ligase RNF216 with ubiquitin |
Heteromer P0CG48; Q9NWF9; | 100 | 5×ZN; 3×GOL; | |||
| SidE-Ubi |
Heteromer P0CG48; Q6BBR6; | 98.68 | ||||
| Mms2/Ubc13~Ubiquitin |
Heteromer P0CG48; P52490; P53152; | 100 | ||||
| Crystal structure of RBR E3 ligase RNF216 in complex with K63-linked di-ubiquitin |
Heteromer P0CG48; Q9NWF9; | 100 | 3×ZN; 4×SO4; 1×GOL; | |||
| Crystal structure of ubiquitin charged Ube2N (Ube2N~Ub) in complex with Ube2V2 |
Heteromer P0CG48; P61088; Q15819; | 100 | ||||
| Crystal structure of K63-specific fab Apu.3A8 bound to K63-linked di-ubiquitin |
Heteromer P0CG48; Q6PIL8; | 100 | ||||
| Structure of G75R Ubiquitin bound to KLHDC3-EloB/C |
Heteromer P0CG48; Q15369; Q15370; Q9BQ90; | 98.68 | 2×GOL; | |||
| SdeA DUB Domain in complex with Ubiquitin |
Heteromer P0CG48; Q5ZTK4; | 100 | ||||
| Crystal structure of Mindy2 (C266A) in complex with Lys48 linked di-ubiquitin (K48-Ub2) |
Heteromer P0CG48; Q8NBR6; | 100 | 4×K; 3×PG4; | |||
| Crystal structure of mouse NEMO CoZi in complex with Lys63-linked di-ubiquitin |
Heteromer O88522; P0CG48; | 98.68 | ||||
| Structure of Shigella effector OspG in complex with host UbcH5c- Ubiquitin conjugate |
Heteromer P0CG48; P61077; Q99PZ6; | 100 | ||||
| Usp21 in complex with a ubiquitin-based, USP21-specific inhibitor |
Heteromer P0CG48; Q9UK80; | 96.05 | 1×ZN; 3×CL; 1×GOL; | |||
| Crystal structure of K63-specific fab Apu2.16 bound to K63-linked di-ubiquitin |
Heteromer P0CG48; Q6PIL8; | 100 | ||||
| Crystal structure of SARS-CoV papain-like protease PLpro in complex with ubiquitin aldehyde |
Heteromer P0C6X7; P0CG48; | 100 | 1×ZN; | |||
| Crystal structure of MavC in complex with substrate mimic in P65 space group |
Heteromer P0CG48; P61088; Q5ZTL4; | 98.68 | ||||
| Structure of the first OTU domain from Legionella pneumophila effector protein LotA bound to K6-lin… |
Heteromer P0CG48; Q5ZTB4; | 100 | ||||
| Crystal structure of TRIM21 RING domain in complex with an isopeptide-linked Ube2N~ubiquitin conjug… |
Heteromer P0CG48; P19474; P61088; | 100 | 4×ZN; 1×MPD; | |||
| Crystal structure of Mindy2 (C266A) in complex with Lys48-linked penta-ubiquitin (K48-Ub5) |
Heteromer P0CG48; Q8NBR6; | 100 | 2×CL; 1×NA; | |||
| SidE-Ubi-NAD |
Heteromer P0CG48; Q6BBR6; | 98.68 | 2×NAD; 2×AMP; | |||
| Crystal structure of K29-linked di-ubiquitin in complex with synthetic antigen binding fragment |
Heteromer P0CG48; | 100 | 4×PO4; | |||
| SidE-Ubi-ADPr |
Heteromer P0CG48; Q6BBR6; | 98.68 | 2×ADP; | |||
| RNF216/E2-Ub/Ub transthiolation complex |
Heteromer P0CG48; P68036; Q9NWF9; | 100 | 7×ZN; 3×SO4; | |||
| Structure of OTUD2 OTU domain in complex with K11-linked di ubiquitin |
Heteromer P0CG48; Q5VVQ6; | 100 | 1×GOL; | |||
| HOIL-1/E2-Ub/Ub transthiolation complex |
Heteromer P0CG48; P68036; Q9BYM8; | 100 | 7×ZN; | |||
| E2~Ubiquitin-HECT |
Heteromer P0CG48; P62837; Q96PU5; | 100 | ||||
| The structure of h/ceOTUB1-ubiquitin aldehyde-UBC13~Ub |
Heteromer P0CG48; P61088; Q96FW1; Q9XVR6; | 100 | ||||
| Crystal structure of human OTUB1/UbcH5b~Ub/Ub |
Heteromer P0CG48; P62837; Q96FW1; | 100 | ||||
| E2~Ubiquitin-HECT |
Heteromer P0CG48; P62837; Q96PU5; | 100 | ||||
| Structure of Lys33-linked diUb bound to Trabid NZF1 |
Heteromer P0CG48; Q9UGI0; | 98.68 | 1×ZN; | |||
| Structure of USP14 bound to ubquitin aldehyde |
Heteromer P0CG48; P54578; | 100 | ||||
| Crystal structure of human OTUB1/UbcH5b~Ub/Ub |
Heteromer P0CG48; P62837; Q96FW1; | 100 | ||||
| Solution structure of the human Mms2-Ubiquitin complex |
Heteromer P0CG48; Q15819; | 98.68 | ||||
| Complex Structures of Mouse Rpn13 (22-130aa) and ubiquitin |
Heteromer P0CG48; Q9JKV1; | 100 | ||||
| Solution Structure of the UbcH5c/Ub Non-covalent Complex |
Heteromer P0CG48; P61077; | 100 | ||||
| Solution structure of the Josephin domain of Ataxin-3 in complex with ubiquitin molecule. |
Heteromer P0CG48; P54252; | 100 | ||||
| gp78CUE domain bound to the distal ubiquitin of K48-linked diubiquitin |
Heteromer P0CG48; Q9UKV5; | 100 | ||||
| Solution structure of PLAA family ubiquitin binding domain (PFUC) trans isomer in complex with ubiq… |
Heteromer P0CG48; Q9Y263; | 100 | ||||
| The solution structure of the K63-Ub2:tUIMs complex |
Heteromer P0CG48; Q96RL1; | 100 | ||||
| Structure of the gp78CUE domain bound to monubiquitin |
Heteromer P0CG48; Q9UKV5; | 100 | ||||
| NMR structure of the Rad18-UBZ/ubiquitin complex |
Heteromer P0CG48; Q9NS91; | 100 | 1×ZN; | |||
| gp78CUE domain bound to the proximal ubiquitin of K48-linked diubiquitin |
Heteromer P0CG48; Q9UKV5; | 100 | ||||
| Structure of the complex of ubiquitin and the ubiquitin-like (UBL) domain of Ddi1 |
Heteromer P0CG48; P40087; | 98.68 | ||||
| Solution Structure of S5a UIM-2/Ubiquitin Complex |
Heteromer P0CG48; P55036; | 100 | ||||
| Distinct ubiquitin binding modes exhibited by sh3 domains: molecular determinants and functional im… |
Heteromer P0CG48; Q9JLQ0; | 100 | ||||
| Solution structure of the complex of ubiquitin and ubiquilin 1 UBA domain |
Heteromer P0CG48; Q9UMX0; | 100 | ||||
| Structure of the UBA Domain of Human NBR1 in Complex with Ubiquitin |
Heteromer P0CG48; Q14596; | 100 | ||||
| UbcH7-Ub Complex with R0RBR Parkin and phosphoubiquitin |
Heteromer O60260; P0CG47; P0CG48; P68036; | 100 | 8×ZN; | |||
| STRUCTURE OF A CONJUGATING ENZYME-UBIQUITIN THIOLESTER COMPLEX |
Heteromer P0CG48; P21734; | 100 | ||||
| NMR structure of minor S5a (196-306):K48 linked diubiquitin species |
Heteromer P0CG48; P55036; | 100 | ||||
| Distinct ubiquitin binding modes exhibited by SH3 domains: molecular determinants and functional im… |
Heteromer P0CG48; Q9JLQ0; | 100 | ||||
| Solution structure of PLAA family ubiquitin binding domain (PFUC) cis isomer in complex with ubiqui… |
Heteromer P0CG48; Q9Y263; | 100 | ||||
| Ubiquitin Recognition by Npl4 Zinc-Fingers |
Heteromer P0CG48; Q9ES54; | 100 | 1×ZN; | |||
| Solution Structure of the Ubiquitin-Associated Domain of Human BMSC-UbP and its Complex with Ubiqui… |
Heteromer P0CG48; Q96S82; | 100 | ||||
| Solution Structure of S5a UIM-1/Ubiquitin Complex |
Heteromer P0CG48; P55036; | 100 | ||||
| NMR based structural model of the UBCH8-UBIQUITIN complex |
Heteromer O14933; P0CG48; | 98.68 | ||||
| USP1 bound to KSQ-4279 and ubiquitin conjugated to FANCD2 (focused refinement) |
Heteromer O94782; P0CG48; | 100 | 1×ZN; 1×A1IB8; | |||
| Catalytic module of human CTLH E3 ligase bound to multiphosphorylated UBE2H~ubiquitin |
Heteromer P0CG48; P62256; Q7L5Y9; Q9H871; | 100 | 2×ZN; | |||
| Active state Dot1 bound to the unacetylated H4 nucleosome |
Heteromer P02281; P06897; P0CG48; P62799; P84233; Q04089; | 98.68 | 1×SAM; | |||
| C(N)RL4CSA-UVSSA-E2-ubiquitin complex. |
Heteromer A0A6P5C4T4; P0CG48; P62877; Q13216; Q13619; Q15843; Q16531; Q2YD98; | 100 | 3×ZN; | |||
| SA-like state of human 26S Proteasome with non-cleavable M1-linked hexaubiquitin and E3 ubiquitin l… |
Heteromer A0A087X2I1; O00231; O00232; O00487; O14818; O43242; P0CG48; P17980; P20618; P25786; P25787; P25788; P25789; P28066; P28070; P28072; P28074; P35998; P43686; P48556; P49720; P49721; P51665; P55036; P60896; P60900; P62191; P62195; Q13200; Q15008; Q99436; Q99460; Q9UNM6; | 100 | 1×ZN; 4×AGS; 5×MG; 2×ADP; | |||
| Cryo-EM structure of USP1-UAF1 bound to FANCI and mono-ubiquitinated FANCD2 without ML323 (consensu… |
Heteromer O94782; P0CG48; Q8TAF3; Q9BXW9; Q9NVI1; | 100 | 1×ZN; | |||
| CRL4CSA-E2-Ub (state 2) |
Heteromer P0CG48; P62837; P62877; Q13216; Q13619; Q15843; Q16531; | 100 | 3×ZN; | |||
| SAGA DUB module bound to a ubiqitinated nucleosome |
Heteromer P02281; P06897; P0CG48; P50102; P53165; P62799; P84233; Q03067; Q6WNK7; | 100 | 8×ZN; | |||
| USP1 bound to ML323 and ubiquitin conjugated to FANCD2 (ordered subset, focused refinement) |
Heteromer O94782; P0CG48; | 100 | 1×ZN; 1×JDA; | |||
| Cryo-EM structure of USP1-UAF1 bound to FANCI and mono-ubiquitinated FANCD2 with ML323 (consensus r… |
Heteromer O94782; P0CG48; Q8TAF3; Q9BXW9; Q9NVI1; | 100 | 1×ZN; 1×JDA; | |||
| PRC2-AEBP2-JARID2 bound to H2AK119ub1 nucleosome |
Heteromer O75530; P02281; P06897; P0CG48; P62799; P84233; Q09028; Q15022; Q15910; Q6ZN18; Q92833; | 98.68 | 1×MG; 1×SAH; 1×ZN; | |||
| Structure of yeast Ubr1 in complex with Ubc2 and N-degron |
Heteromer P06104; P0CG48; P19812; | 98.68 | 7×ZN; | |||
| Structure of monoubiquitinated FANCD2 in complex with FANCI and DNA |
Heteromer B0I564; P0CG48; | 100 | ||||
| Catalytic module of yeast GID E3 ligase bound to multiphosphorylated Ubc8~ubiquitin |
Heteromer P0CG48; P28263; P40492; Q12508; | 100 | 2×ZN; | |||
| Mono-ubiquitinated Fanconi Anemia ID complex bound to ICL DNA |
Heteromer P0CG48; Q9BXW9; Q9NVI1; | 100 | ||||
| Structure of mono-ubiquitinated FANCD2 bound to non-ubiquitinated FANCI and to DNA |
Heteromer P0CG48; Q9BXW9; Q9NVI1; | 100 | ||||
| Structure of E3 ligase VsHECT bound to ubiquitin |
Heteromer A0A2V2RSR1; P0CG48; | 100 | 1×AYE; | |||
| Crystal structure of UCHL3-UbVME complex |
Heteromer P0CG48; P15374; | 100 | 3×MG; 1×GVE; | |||
| Equine arteritis virus papain-like protease 2 (PLP2) covalently bound to ubiquitin |
Heteromer P0CG48; P19811; | 100 | 1×ZN; 2×GOL; | |||
| Structure of Ovarian Tumor (OTU) domain in complex with Ubiquitin |
Heteromer P0CG48; P43558; | 100 | 1×3CN; | |||
| Crystal structure of Trichinella spiralis UCH37 catalytic domain bound to Ubiquitin vinyl methyl es… |
Heteromer P0CG48; | 100 | 1×DTT; 1×NA; 1×GVE; | |||
| Viral tegument-like DUBs |
Heteromer D6YWY5; P0CG48; | 100 | 1×CIT; 1×AYE; | |||
| Structure of E3 ligase SopA bound to ubiquitin |
Heteromer P0CG48; Q8ZNR3; | 100 | 1×AYE; | |||
| RPN13 (19-132)-RPN2 (940-952) pY950-Ub complex |
Heteromer P0CG48; Q16186; Q99460; | 100 | 6×EDO; | |||
| The crystal structure of E2-25K and UBB+1 complex |
Heteromer P0CG48; P61086; | 100 | ||||
| Crystal structure of the ubiquitin-specific protease encoded by murine cytomegalovirus tegument pro… |
Heteromer P0CG48; | 100 | 2×MG; 1×GVE; 1×PG4; | |||
| Crystal structure of an OTU deubiquitinase from Wolbachia pipientis wMel bound to ubiquitin |
Heteromer P0CG48; Q73HU7; | 100 | 1×FLC; | |||
| Crystal structure of Trichinella spiralis UCH37 bound to Ubiquitin vinyl methyl ester |
Heteromer P0CG48; | 100 | 1×GVE; | |||
| Crystal Structure of Human Otubain2 and Ubiquitin Complex |
Heteromer P0CG48; Q96DC9; | 100 | 3×GOL; 1×NEH; | |||
| Maize rayado fino virus protease in complex with Ubiquitin |
Heteromer P0CG48; Q91TW9; | 100 | 2×GOL; 1×3CN; | |||
| Crystal Structure of MavC in Complex with Ub-UbE2N |
Heteromer P0CG48; P61088; Q5ZTL4; | 100 | ||||
| Crystal structure of an OTU deubiquitinase from Escherichia albertii bound to ubiquitin |
Heteromer P0CG48; | 100 | 3×FMT; | |||
| Covalent Ubiquitin-USP2 Complex |
Heteromer O75604; P0CG48; | 100 | 1×ZN; 1×NEH; | |||
| Crystal structure of Plasmodium falciparum UCHL3 in complex with the suicide inhibitor UbVME |
Heteromer P0CG48; Q8IKM8; | 100 | 1×CL; | |||
| Structure of Ovarian Tumor (OTU) domain in complex with Ubiquitin |
Heteromer P0CG48; P43558; | 100 | 1×3CN; | |||
| Crystal structure of the S18Y variant of ubiquitin carboxy terminal hydrolase L1 bound to ubiquitin… |
Heteromer P09936; P0CG48; | 100 | 1×GVE; | |||
| Gumby/Fam105B in complex with ubiquitin |
Heteromer P0CG48; Q96BN8; | 100 | 1×SO4; | |||
| Structure of a viral OTU domain protease bound to Ubiquitin |
Heteromer P0CG48; Q6TQR6; | 100 | 3×SO4; 1×ACT; 1×4LJ; | |||
| Structure of E3 ligase NleL bound to ubiquitin |
Heteromer A0A0H3JDV8; P0CG48; | 100 | 1×AYE; | |||
| Structure of Burkholderia pseudomallei deubiquitinase TssM in complex with ubiquitin |
Heteromer P0CG48; Q63K53; | 100 | 1×GOL; 1×AYE; | |||
| Cdc34-ubiquitin-CC0651 complex |
Heteromer P0CG48; P49427; | 100 | 1×U94; | |||
| Crystal structure of a Josephin-ubiquitin complex: Evolutionary restraints on ataxin-3 deubiquitina… |
Heteromer P0CG48; Q9H3M9; | 100 | 1×NA; | |||
| Crystal structure of the I93M mutant of ubiquitin carboxy terminal hydrolase L1 bound to ubiquitin … |
Heteromer P09936; P0CG48; | 100 | 1×GVE; | |||
| Covalent Ubiquitin-Usp5 Complex |
Heteromer P0CG48; P45974; | 100 | 1×ZN; 1×NEH; | |||
| Crystal structure of ubiquitin carboxy terminal hydrolase L1 bound to ubiquitin vinylmethylester |
Heteromer P09936; P0CG48; | 100 | 1×GVE; | |||
| Diversity of ubiquitin and ISG15 specificity amongst nairoviruses viral ovarian tumor domain protea… |
Heteromer P0CG48; Q66431; | 100 | 1×4LJ; 1×SO4; | |||
| Structure of SARS PLpro bound to a Lys48-linked di-ubiquitin activity based probe |
Heteromer P0C6X7; P0CG47; P0CG48; | 98.67 | 1×ACT; 1×NI; | |||
| Structure of an Rsp5xUbxSna3 complex: Mechanism of ubiquitin ligation and lysine prioritization by … |
Heteromer P0CG48; P14359; P39940; | 98.67 | ||||
| X-ray structure of Turnip Yellow Mosaic Virus PRO/DUB in complex with Ubiquitin |
Heteromer P0CG48; P10358; | 100 | 1×GVE; | |||
| Structure of an Ubiquitin complex |
Heteromer O95786; P0CG48; | 100 | ||||
| CIN85 Sh3-C domain in complex with ubiquitin |
Heteromer P0CG48; Q96B97; | 100 | ||||
| Ubiquitin ligation to substrate by a cullin-RING E3 ligase & Cdc34: NEDD8-CUL2-RBX1-ELOB/C-FEM1C wi… |
Heteromer P0CG48; P62877; Q13617; Q15369; Q15370; Q712K3; Q96JP0; Q9H173; | 100 | 1×U9O; 3×ZN; | |||
| Yeast COMPASS in complex with a ubiquitinated nucleosome |
Heteromer P02281; P06897; P0CG48; P38123; P38827; P39706; P43132; P62799; P84233; Q03012; Q03323; | 100 | 1×ZN; 1×SAM; | |||
| Ubiquitin Ligation to substrate by a cullin-RING E3 ligase at 3.7A resolution: NEDD8-CUL1-RBX1 N98R… |
Heteromer H2QLR9; P0CG48; P25963; P62837; P63208; Q13616; Q15843; Q9Y297; | 100 | 3×ZN; | |||
| Ubiquitin ligation to F-box protein substrates by SCF-RBR E3-E3 super-assembly: NEDD8-CUL1-RBX1-SKP… |
Heteromer P0CG48; P20248; P24941; P46527; P61024; P62877; P63208; P68036; Q13309; Q13616; Q15843; Q9Y4X5; | 100 | 9×ZN; 1×SY8; | |||
| Ubiquitin ligation to F-box protein substrates by SCF-RBR E3-E3 super-assembly: NEDD8-CUL1-RBX1-UBE… |
Heteromer P0CG48; P62877; P68036; Q13616; Q15843; Q9Y4X5; | 100 | 9×ZN; 1×SY8; | |||
| Ubiquitin ligation to neosubstrate by a cullin-RING E3 ligase & Cdc34: NEDD8-CUL2-RBX1-ELOB/C-VHL-M… |
Heteromer O60885; P0CG48; P40337; P62877; Q13617; Q15369; Q15370; Q712K3; | 100 | 3×ZN; 1×SY8; 1×759; | |||
| Ubiquitin ligation to F-box protein substrates by SCF-RBR E3-E3 super-assembly: CUL1-RBX1-SKP1-SKP2… |
Heteromer P0CG48; P46527; P61024; P62877; P63208; Q13309; Q13616; Q9Y4X5; | 100 | 5×ZN; | |||
| (NEDD8)-CRL2VHL-MZ1-Brd4BD2-Ub(G76S, K48C)-UBE2R1(C93K, S138C, C191S, C223S)-Ub |
Heteromer O60885; P0CG48; P40337; P49427; P62877; Q13617; Q15369; Q15370; Q15843; | 100 | 1×759; 3×ZN; | |||
| Active state Dot1 bound to the H4K16ac nucleosome |
Heteromer P02281; P06897; P0CG48; P62799; P84233; Q04089; | 98.67 | 1×SAM; | |||
| Active state Dot1L bound to the H2B-Ubiquitinated nucleosome, 1-to-1 complex |
Heteromer P02281; P06897; P0CG48; P62799; P84233; Q8TEK3; | 100 | 1×SAM; | |||
| Structure of ubiquitin bound to coiled coil-UIM form 1 |
Heteromer P0CG48; | 100 | 1×A1IDH; | |||
| Crystal structure of A20 ZF7 in complex with linear ubiquitin, form I |
Heteromer P0CG48; P21580; | 100 | 1×ZN; 1×K; | |||
| PDE-Ubiquitin |
Heteromer P0CG48; Q6BBR6; | 100 | ||||
| ANTH domain of CALM (clathrin-assembly lymphoid myeloid leukemia protein) bound to ubiquitin |
Heteromer O55012; P0CG48; | 100 | ||||
| The catalytic domain of USP8 in complex with a USP8 specific inhibitor |
Heteromer P0CG48; P40818; | 83.78 | 1×ZN; | |||
| MavC-UBE2N-Ub complex |
Heteromer P0CG48; P61088; Q5ZTL4; | 100 | ||||
| K33-specific affimer bound to K33 diUb |
Heteromer P0CG48; | 100 | 2×SO4; 4×GOL; | |||
| Structure of BARD1 ARD-BRCTs in complex with H2AKc15ub nucleosomes (Map1) |
Heteromer M3WD26; P0C0S8; P0CG48; P62805; P62807; P68431; | 100 | ||||
| Structure of ubiquitin bound of coiled-coil UIM form 2 |
Heteromer P0CG48; | 100 | 1×A1IDH; | |||
| Ubiquitin binding variants |
Heteromer P0CG48; Q9UJX6; | 100 | ||||
| PDE-Ubi-ADPr |
Heteromer P0CG48; Q6BBR6; | 100 | 1×AMP; | |||
| Crystal structure of OTUB1 in complex with ubiquitin variant |
Heteromer P0CG48; Q96FW1; | 91.78 | ||||
| Crystal structure of human STAM1 VHS domain in complex with ubiquitin |
Heteromer P0CG48; Q92783; | 100 | ||||
| Structural basis for ubiquitin recognition by the human EAP45/ESCRT-II GLUE domain |
Heteromer P0CG48; Q86VN1; | 100 | ||||
| X-ray structure of the non-covalent complex between UbcH5A and Ubiquitin |
Heteromer P0CG48; P51668; | 100 | ||||
| Crystal Structure of a Complex of NOD1 CARD and Ubiquitin |
Heteromer P0CG48; Q9Y239; | 100 | 1×PO4; | |||
| Structure of PINK1 bound to ubiquitin |
Heteromer E0W1I1; P0CG48; | 97.26 | 3×GOL; | |||
| HHARI/ARIH1-UBCH7~Ubiquitin |
Heteromer P0CG48; P68036; Q9Y4X5; | 100 | 6×ZN; | |||
| Crystal structure of the UBA domain of Dsk2 in complex with Ubiquitin |
Heteromer P0CG48; P48510; | 100 | ||||
| TSG101(UEV) domain in complex with Ubiquitin |
Heteromer P0CG48; Q99816; | 100 | 2×CU; 2×SO4; | |||
| Crystal structure of hRpn13 Pru domain in complex with Ubiquitin and XL44 |
Heteromer P0CG48; Q16186; | 100 | 2×ZTO; | |||
| The crystal structure of E2-25K and ubiquitin complex |
Heteromer P0CG48; P61086; | 100 | ||||
| CRYSTAL STRUCTURE OF NEDD4 WITH A UB VARIANT |
Heteromer P0CG48; P46934; | 88.89 | ||||
| CRYSTAL STRUCTURE OF E3 LIGASE ITCH WITH A UB VARIANT |
Heteromer P0CG48; Q96J02; | 85.92 | ||||
| RNF12 RING domain in complex with a Ube2d2~Ub conjugate |
Heteromer P0CG48; P62837; Q9NVW2; | 100 | 2×ZN; 2×IOD; | |||
| Crystal structure of the A20 ZnF4, ubiquitin and UbcH5A complex |
Heteromer P0CG48; P21580; P51668; | 100 | 1×ZN; | |||
| Cryo-EM structure of human DNMT3A UDR bound to H2AK119ub1-modified nucleosome |
Heteromer P02281; P02302; P06897; P0CG48; P62799; Q9Y6K1; | 100.0 | ||||
| RCR E3 ligase E2-Ubiquitin transthiolation intermediate |
Heteromer O75592; P0CG48; P61077; | 100 | 6×ZN; 1×LWZ; | |||
| Ubiquitin variant UbV.k.1 in complex with Ube2k |
Heteromer P0CG47; P0CG48; P61086; | 100 | ||||
| BAP1/ASXL1 bound to the H2AK119Ub Nucleosome |
Heteromer P02281; P06897; P0CG48; P62799; P84233; Q8IXJ9; Q92560; | 100.0 | ||||
| Focused map of Cryo-EM structure of Ubiquitin C-degron bound to KLHDC10-EloB/C |
Heteromer P0CG48; Q15369; Q15370; Q6PID8; | 100 | ||||
| Crystal structure of human insulin-degrading enzyme in complex with ubiquitin |
Heteromer P0CG48; P14735; | 100 | 1×ZN; 1×DIO; | |||
| CRYSTAL STRUCTURE OF LYS48-LINKED TETRAUBIQUITIN | homo-4-mer | 100 | 4×SO4; | |||
| Cyclic Lys48-linked tetraubiquitin | homo-4-mer | 100 | 4×SO4; | |||
| Crystal structure and solution NMR studies of Lys48-linked tetraubiquitin at neutral pH | homo-4-mer | 100 | 3×SO4; 2×MES; | |||
| Crystal structure of K11-linked diubiquitin | homo-4-mer | 100 | 8×EDO; 3×CL; | |||
| STRUCTURE OF A NEW CRYSTAL FORM OF TETRAUBIQUITIN | homo-4-mer | 100 | ||||
| New compact conformation of linear Ub2 structure | homo-2-mer | 100 | ||||
| Crystal structure of an open conformation of Lys48-linked diubiquitin at pH 7.5 | homo-2-mer | 100 | 2×GOL; 1×EPE; | |||
| Structure of Lys33-linked diUb | homo-2-mer | 98.68 | 3×GOL; 2×SO4; | |||
| Crystal structure of K63-linked di-ubiquitin | homo-2-mer | 98.67 | 7×CD; | |||
| crystal structure of Lys63-linked di-ubiquitin | homo-2-mer | 100 | 2×CD; 1×MG; 2×CO; 1×CL; | |||
| Crystal structure of wild-type Lys48-linked diubiquitin in an open conformation | homo-2-mer | 100 | ||||
| STRUCTURE OF TETRAUBIQUITIN SHOWS HOW MULTIUBIQUITIN CHAINS CAN BE FORMED | homo-2-mer | 100 | ||||
| NMR structure of Lys48-linked di-ubiquitin using chemical shift perturbation data together with RDC… | homo-2-mer | 100 | ||||
| Ensemble structure of the closed state of Lys63-linked diubiquitin in the absence of a ligand | homo-2-mer | 97.37 | 2×MTN; | |||
| Crystal structures of K63-linked di- and tri-ubiquitin reveal a highly extended chain architecture | homo-2-mer | 100 | 10×ZN; | |||
| NMR Based Structure of the Closed Conformation of LYS48-Linked Di-Ubiquitin Using Experimental Glob… | homo-2-mer | 100 | ||||
| NMR Based Structure of the Open Conformation of LYS48-Linked Di-UBiquitin Using Experimental Global… | homo-2-mer | 100 | ||||
| K11-linked Diubiquitin average solution structure at pH 6.8, 0 mM NaCl | homo-2-mer | 100 | ||||
| K11-linked Diubiquitin average solution structure at pH 6.8, 150 mM NaCl | homo-2-mer | 100 | ||||
| Solution structure of a dimeric N-terminal fragment of human ubiquitin | homo-2-mer | 98.11 | ||||
| crystal structure of linear di-ubiquitin | monomer | 100 | 4×ZN; 1×CL; | |||
| Engineering Domain-Swapped Binding Interfaces by Mutually Exclusive Folding: Insertion of Ubiquitin… | monomer | 100 | 16×SO4; | |||
| Automated NMR Structure of the UBB by FAPSY | monomer | 97.44 | ||||
| the solution structure of UBB+1, frameshift mutant of ubiquitin B | monomer | 97.44 | ||||
| Backbone Structure of Ubiquitin determined using Backbone amide NOEs and Backbone N-H and N-C RDCs | monomer | 100 | ||||
| Synthetic Ubiquitin with fluoro-Leu at 50 and 67 | monomer | 100 | ||||
| C-terminally retracted ubiquitin T66V/L67N mutant | monomer | 97.37 | 8×SO4; | |||
| The crystal structure of human Ubiquitin adduct with Zeise's salt | monomer | 100 | 3×PT; | |||
| SYNTHETIC STRUCTURAL AND BIOLOGICAL STUDIES OF THE UBIQUITIN SYSTEM. PART 1 | monomer | 100 | ||||
| STRUCTURE OF UBIQUITIN REFINED AT 1.8 ANGSTROMS RESOLUTION | monomer | 100 | ||||
| The Structure and conformation of Lys-63 linked tetra-ubiquitin | monomer | 100 | 2×ZN; | |||
| Crystal Structure of the UbArk2C fusion protein | monomer | 100.0 | 2×GOL; 2×ZN; | |||
| Structure of ubiquitin solved by SAD using the Lanthanide-Binding Tag | monomer | 98.68 | 2×TB; | |||
| Crystal Structure of cubic Zn3-hUb (human ubiquitin) adduct | monomer | 100 | 3×ZN; | |||
| The MUMO (minimal under-restraining minimal over-restraining) method for the determination of nativ… | monomer | 100 | ||||
| SOLUTION STRUCTURE OF THE DESIGNED HYDROPHOBIC CORE MUTANT OF UBIQUITIN, 1D7 | monomer | 90.79 | ||||
| Simultaneous determination of protein structure and dynamics | monomer | 100 | ||||
| A Correspondence Between Solution-State Dynamics of an Individual Protein and the Sequence and Conf… | monomer | 100 | ||||
| ROTAMER STRAIN AS A DETERMINANT OF PROTEIN STRUCTURAL SPECIFICITY | monomer | 89.47 | ||||
| PERE NMR structure of ubiquitin | monomer | 100 | ||||
| Proton-Detected 4D DREAM Solid-State NMR Structure of Ubiquitin | monomer | 100 | ||||
| UBIQUITIN NMR STRUCTURE | monomer | 100 | ||||
| Solid-State NMR Structure of Microcrystalline Ubiquitin | monomer | 100 | ||||
| STRUCTURE OF RECOMBINANT HUMAN UBIQUITIN IN AOT REVERSE MICELLES | monomer | 100 | ||||
| Solution structure of lysine-free (K0) ubiquitin | monomer | 90.79 | ||||
| The pure alternative state of ubiquitin | monomer | 98.68 | ||||
| EROS3 RDC and NOE Derived Ubiquitin Ensemble | monomer | 100 | ||||
| A tensor-free method for the structural and dynamical refinement of proteins using residual dipolar… | monomer | 100 | ||||
| C-terminally retracted ubiquitin L67S mutant | monomer | 98.67 | 1×SO4; | |||
| Crystal Structure of the 9-10 MoaD Insertion Mutant of Ubiquitin | monomer | 100 | ||||
| New strategy to analyze structures of glycopeptide-target complexes | monomer | 100 | 2×TLA; 1×N1L; 1×MAN; 1×M12; | |||
| The structure of monodechloro-teicoplanin in complex with its ligand, using ubiquitin as a ligand c… | monomer | 100 | 1×GCS; 1×T55; 1×NAG; 1×MAN; | |||
| Crystal structure of Zn2-E16V human ubiquitin (hUb) mutant adduct, from a solution 35 mM zinc aceta… | monomer | 98.65 | 4×ACT; 5×ZN; | |||
| Crystal Structure of ubiquitin P37A/P38A | monomer | 97.3 | 3×ZN; | |||
| Observing the overall rocking motion of a protein in a crystal - Cubic Ubiquitin crystals. | monomer | 100 | 3×ZN; | |||
| Crystal Structure of the 9-10 8 Glycine Insertion Mutant of Ubiquitin. | monomer | 100 | ||||
| Crystal Structure of the 35-36 8 Glycine Insertion Mutant of Ubiquitin | monomer | 100 | ||||
| Crystal Structure of the 35-36 8 Glycine Insertion Mutant of Ubiquitin | monomer | 100 | ||||
| Structure of Lys33-linked triUb S.G. P 212121 | monomer | 98.63 | ||||
| X-ray structure of human ubiquitin Cd(II) adduct | monomer | 100 | 6×CD; | |||
| Crystal structure of Zn1.3-E16V human ubiquitin (hUb) mutant adduct, from a solution 35 mM zinc ace… | monomer | 98.61 | 2×ZN; 1×ACT; 2×PEG; | |||
| U7Ub25.2540 | monomer | 87.5 | 1×SO4; | |||
| Crystal structure of Zn3-hUb(human ubiquitin) adduct from a solution 70 mM zinc acetate/20% v/v TFE… | monomer | 100 | 2×ACT; 4×ZN; | |||
| Crystal structure of Zn2.3-hUb (human ubiquitin) adduct from a solution 70 mM zinc acetate/1.3 mM h… | monomer | 100 | 4×ZN; 1×ACT; 2×EDO; 1×PEG; | |||
| Crystal structure of Zn3-hUb(human ubiquitin) adduct from a solution 100 mM zinc acetate/1.3 mM hUb | monomer | 100 | 4×ZN; 1×ACT; 1×EDO; | |||
| Crystal structure of Human Ubiquitin in a new crystal form | monomer | 100 | ||||
| X-ray structure of human ubiquitin-Hg(II) adduct | monomer | 100 | 1×HG; | |||
| Crystal Structure of the 35-36 MoaD Insertion Mutant of Ubiquitin | monomer | 100 | 3×CD; | |||
| R1EN(5-227)-ubiquitin fusion | monomer | 100 | 1×ACY; | |||
| R1EN(5-225)-ubiquitin fusion | monomer | 100 | 1×ACY; | |||
| Crystal structure of Thr66 ADP-ribosylated ubiquitin | monomer | 100 | 1×APR; 1×ZN; 2×MG; | |||
| Crystal structure of Zn2.7-E16V human ubiquitin (hUb) mutant adduct, from a solution 100 mM zinc ac… | monomer | 98.59 | 6×ZN; 4×ACT; | |||
| Crystal structure of a multiple hydrophobic core mutant of ubiquitin | monomer | 90.14 | ||||
| Crystal structure of Zn2-hUb (human ubiquitin) adduct from a solution 35 mM zinc acetate/1.3 mM hUb | monomer | 100 | 2×ZN; 1×EDO; | |||
| X-ray structure of human ubiquitin Zn(II) adduct | monomer | 100 | 1×ZN; | |||
| Observing the overall rocking motion of a protein in a crystal. | monomer | 100 | 2×ZN; | |||
8 SWISS-MODEL models
| Template | Oligo-state | QMEAN | Range | Ligands | Trg-Tpl Seq id (%) | |
|---|---|---|---|---|---|---|
| 7sbi.1.A | monomer | 0.74 | 36.42 | |||
| 8peq.3.B | monomer | 0.71 | 88.67 | |||
| 8peq.1.B | monomer | 0.71 | 88.08 | |||
| 8peq.3.B | monomer | 0.71 | 88.08 | |||
| 8pf0.1.A | monomer | 0.71 | 1×IMD; | 86.84 | ||
| 8pf0.1.A | monomer | 0.70 | 1×IMD; | 86.18 | ||
| 8peq.3.B | monomer | 0.69 | 88.08 | |||
| 3q3f.1.A | monomer | 0.52 | 70.23 | |||