SMTL ID : 8b3i.1

CRL4CSA-E2-Ub (state 2)

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-1-1-mer

Ligands

3 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain C: C.42, I.44, C.45, H.80, C.83 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.42, C:C.45, C:H.80, C:C.83 ZN.2: 4 residues within 4Å: Chain C: C.75, H.77, C.94, D.97 5 PLIP interactions: 5 interactions with chain C Metal complexes: C:C.75, C:H.77, C:C.94, C:D.97, C:D.97 ZN.3: 5 residues within 4Å: Chain C: C.53, C.56, C.68, H.80, H.82 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.53, C:C.56, C:C.68, C:H.82

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kokic, G. et al., C(N)RL4CSA-E2-Ub (state 2). To Be Published

Release Date

2023-09-27

Peptides

Ubiquitin-conjugating enzyme E2 D2: A
NEDD8: B
E3 ubiquitin-protein ligase RBX1: C
Ubiquitin: D
DNA excision repair protein ERCC-8: E
DNA damage-binding protein 1: F
Cullin-4A: G

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
N

C
R

D
U

E
a

F
d

G
e

Ubiquitin-conjugating enzyme E2 D2

NEDD8

E3 ubiquitin-protein ligase RBX1

Ubiquitin

DNA excision repair protein ERCC-8

DNA damage-binding protein 1

Cullin-4A

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