SMTL ID : 3a33.1

UbcH5b~Ubiquitin Conjugate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

hetero-2-2-mer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 7 residues within 4Å: Chain A: P.68, K.69, V.70, S.86, I.87, L.92, R.93 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:P.68, A:V.70, A:I.87, A:I.87 GOL.2: 7 residues within 4Å: Chain C: P.68, K.69, V.70, S.86, I.87, L.92, R.93 4 PLIP interactions: 4 interactions with chain C Hydrogen bonds: C:P.68, C:V.70, C:I.87, C:I.87

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sakata, E. et al., Crystal Structure of UbcH5b~Ubiquitin Intermediate: Insight into the Formation of the Self-Assembled E2~Ub Conjugates. Structure (2010)

Release Date

2009-11-24

Peptides

Ubiquitin-conjugating enzyme E2 D2: AC
Ubiquitin: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

B
B

D
B

Ubiquitin-conjugating enzyme E2 D2

Ubiquitin

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