SMTL ID : 7r71.1

Crystal Structure of the UbArk2C-UbcH5b~Ub complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

hetero-1-1-1-mer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.149, H.151, C.168, C.171 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.149, A:H.151, A:C.168, A:C.171 ZN.2: 4 residues within 4Å: Chain A: C.131, C.134, H.154, C.157 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.131, A:C.134, A:H.154, A:C.157

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Paluda, A. et al., Ubiquitin and a charged loop regulate the ubiquitin E3 ligase activity of Ark2C. Nat Commun (2022)

Release Date

2022-03-09

Peptides

Ubiquitin,E3 ubiquitin-protein ligase RNF165: A
Ubiquitin: B
Ubiquitin-conjugating enzyme E2 D2: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
D

C
C

Ubiquitin,E3 ubiquitin-protein ligase RNF165

Ubiquitin

Ubiquitin-conjugating enzyme E2 D2

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