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SMTL ID : 4whr.1

Anhydride reaction intermediate trapped in Protocatechuate 3,4-dioxygenase (pseudomonas putida) at pH 8.5

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 1.58 Å
Oligo State
hetero-12-12-mer
Ligands
56 x 3N8: 4-fluorobenzene-1,2-diol(Non-covalent)
16 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)
12 x FE: FE (III) ION(Non-covalent)
4 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)
4 x 3NJ: 4-fluorooxepine-2,7-dione(Non-covalent)
4 x CL: CHLORIDE ION(Non-functional Binders)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Knoot, C.J. et al., Crystal structures of alkylperoxo and anhydride intermediates in an intradiol ring-cleaving dioxygenase. Proc.Natl.Acad.Sci.USA (2015)
Release Date
2014-12-31
Peptides
Protocatechuate 3,4-dioxygenase alpha chain: ABCGHIMNOSTU
Protocatechuate 3,4-dioxygenase beta chain: DEFJKLPQRVWX
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
E
C
C
G
A
H
E
I
C
M
A
N
E
O
C
S
A
T
E
U
C
D
D
E
B
F
F
J
D
K
B
L
F
P
D
Q
B
R
F
V
D
W
B
X
F

Protocatechuate 3,4-dioxygenase alpha chain

Toggle Identical (ABCGHIMNOSTU)

Protocatechuate 3,4-dioxygenase beta chain

Toggle Identical (DJPV) Toggle Identical (EKQW) Toggle Identical (FLRX)

Related Entries With Identical Sequence

1ykk.1 | 1ykl.1 | 1ykm.1 | 1ykn.1 | 1yko.1 | 1ykp.1 | 2pcd.1 | 3lkt.1 | 3lmx.1 | 3lxv.1 | 3mfl.1 | 3mi1.1 | 3mi5.1 | 3mv4.1 | 3mv6.1 | 3pca.1 | 3pcb.1 | 3pcc.1 | 3pcd.1 | 3pce.1 | 3pcf.1 | 3pcg.1 | 3pch.1 | 3pci.1 | 3pci.2 | 3pcj.1 | 3pck.1 | 3pcl.1 | 3pcm.1 | 3pcn.1  more...