SMTL ID : 9gxx.1

70S ribosome with doublet-decoding tRNASer3 bound to A-site GCA codon

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
288 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)
7 x SPD: SPERMIDINE(Non-functional Binders)(Non-covalent)
7 x PUT: 1,4-DIAMINOBUTANE(Non-functional Binders)(Non-covalent)
1 x SPM: SPERMINE(Non-functional Binders)
2 x ZN: ZINC ION(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Krishnaswamy, S. et al., Doublet decoding of tRNASer3 demonstrates plasticity of ribosomal decoding center. To Be Published
Release Date
2025-05-28
Peptides
Small ribosomal subunit protein uS2: B
Small ribosomal subunit protein uS3: C
Small ribosomal subunit protein uS4: D
Small ribosomal subunit protein uS5: E
Small ribosomal subunit protein bS6, fully modified isoform: F
Small ribosomal subunit protein uS7: G
Small ribosomal subunit protein uS8: H
Small ribosomal subunit protein uS9: I
Small ribosomal subunit protein uS10: J
Small ribosomal subunit protein uS11: K
Small ribosomal subunit protein uS12: L
Small ribosomal subunit protein uS13: M
Small ribosomal subunit protein uS14: N
Small ribosomal subunit protein uS15: O
Small ribosomal subunit protein bS16: P
Small ribosomal subunit protein uS17: Q
Small ribosomal subunit protein bS18: R
Small ribosomal subunit protein uS19: S
Small ribosomal subunit protein bS20: T
Small ribosomal subunit protein bS21: U
Large ribosomal subunit protein uL2: 1
Large ribosomal subunit protein uL3: 2
Large ribosomal subunit protein uL4: 3
Large ribosomal subunit protein uL5: 4
Large ribosomal subunit protein uL6: 5
Large ribosomal subunit protein bL9: 6
Large ribosomal subunit protein uL13: 7
Large ribosomal subunit protein uL14: 8
Large ribosomal subunit protein uL15: 9
Large ribosomal subunit protein uL16: a
Large ribosomal subunit protein bL17: b
Large ribosomal subunit protein uL18: c
Large ribosomal subunit protein bL19: d
Large ribosomal subunit protein bL20: e
Large ribosomal subunit protein bL21: f
Large ribosomal subunit protein uL22: g
Large ribosomal subunit protein uL23: h
Large ribosomal subunit protein uL24: i
Large ribosomal subunit protein bL25: j
Large ribosomal subunit protein bL27: k
Large ribosomal subunit protein bL28: l
Large ribosomal subunit protein uL29: m
Large ribosomal subunit protein uL30: n
Large ribosomal subunit protein bL32: o
Large ribosomal subunit protein bL33: p
Large ribosomal subunit protein bL34: q
Large ribosomal subunit protein bL35: r
Large ribosomal subunit protein bL36A: s
Large ribosomal subunit protein bL31A: t
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
B
B
C
C
D
D
E
E
F
F
G
G
H
H
I
I
J
J
K
K
L
L
M
M
N
N
O
O
P
P
Q
Q
R
R
S
S
T
T
U
U
1
c
2
d
3
e
4
f
5
g
6
h
7
i
8
j
9
k
a
l
b
m
c
n
d
o
e
p
f
q
g
r
h
s
i
t
j
u
k
v
l
w
m
x
n
y
o
z
p
0
q
1
r
2
s
3
t
4

Small ribosomal subunit protein uS2

Small ribosomal subunit protein uS3

Small ribosomal subunit protein uS4

Small ribosomal subunit protein uS5

Small ribosomal subunit protein bS6, fully modified isoform

Small ribosomal subunit protein uS7

Small ribosomal subunit protein uS8

Small ribosomal subunit protein uS9

Small ribosomal subunit protein uS10

Small ribosomal subunit protein uS11

Small ribosomal subunit protein uS12

Small ribosomal subunit protein uS13

Small ribosomal subunit protein uS14

Small ribosomal subunit protein uS15

Small ribosomal subunit protein bS16

Small ribosomal subunit protein uS17

Small ribosomal subunit protein bS18

Small ribosomal subunit protein uS19

Small ribosomal subunit protein bS20

Small ribosomal subunit protein bS21

Large ribosomal subunit protein uL2

Large ribosomal subunit protein uL3

Large ribosomal subunit protein uL4

Large ribosomal subunit protein uL5

Large ribosomal subunit protein uL6

Large ribosomal subunit protein bL9

Large ribosomal subunit protein uL13

Large ribosomal subunit protein uL14

Large ribosomal subunit protein uL15

Large ribosomal subunit protein uL16

Large ribosomal subunit protein bL17

Large ribosomal subunit protein uL18

Large ribosomal subunit protein bL19

Large ribosomal subunit protein bL20

Large ribosomal subunit protein bL21

Large ribosomal subunit protein uL22

Large ribosomal subunit protein uL23

Large ribosomal subunit protein uL24

Large ribosomal subunit protein bL25

Large ribosomal subunit protein bL27

Large ribosomal subunit protein bL28

Large ribosomal subunit protein uL29

Large ribosomal subunit protein uL30

Large ribosomal subunit protein bL32

Large ribosomal subunit protein bL33

Large ribosomal subunit protein bL34

Large ribosomal subunit protein bL35

Large ribosomal subunit protein bL36A

Large ribosomal subunit protein bL31A

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