- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 1 x 01: (2S,3S)-2-[[(2S)-2-[[(2S,4S)-5-aminocarbonyloxy-4-oxidanyl-2-[[(2S,3R)-3-oxidanylpiperidin-2-yl]carbonylamino]pentanoyl]amino]-3-(1H-imidazol-4-yl)propanoyl]amino]-3-(2-chloranyl-1H-imidazol-4-yl)-3-oxidanyl-propanoic acid
01.1: 9 residues within 4Å:- Chain A: G.693, U.788, U.789, A.792, A.794, C.795, C.796
- Chain F: R.128, V.129
1 PLIP interactions:1 interactions with chain F- Hydrogen bonds: F:V.129
- 92 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)
- 6 x K: POTASSIUM ION(Non-functional Binders)(Non-covalent)
K.94: 5 residues within 4Å:- Chain A: C.1500, A.1501, G.1503, A.1506, A.1507
No protein-ligand interaction detected (PLIP)K.95: 2 residues within 4Å:- Chain A: A.780, G.800
No protein-ligand interaction detected (PLIP)K.96: 4 residues within 4Å:- Chain A: G.417, C.418, G.425, U.426
No protein-ligand interaction detected (PLIP)K.97: 1 residues within 4Å:- Chain A: G.886
No protein-ligand interaction detected (PLIP)K.98: 2 residues within 4Å:- Chain A: U.789, A.790
No protein-ligand interaction detected (PLIP)K.99: 3 residues within 4Å:- Chain A: U.333, G.350
- Chain L: A.2
No protein-ligand interaction detected (PLIP)- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Schedlbauer, A. et al., A binding site for the antibiotic GE81112 in the ribosomal mRNA channel. bioRxiv (2024)
- Release Date
- 2025-08-06
- Peptides
- Small ribosomal subunit protein uS4: B
Small ribosomal subunit protein uS5: C
Small ribosomal subunit protein bS6, fully modified isoform: D
Small ribosomal subunit protein uS8: E
Small ribosomal subunit protein uS11: F
Small ribosomal subunit protein uS12: G
Small ribosomal subunit protein uS15: H
Small ribosomal subunit protein bS16: I
Small ribosomal subunit protein uS17: J
Small ribosomal subunit protein bS18: K
Small ribosomal subunit protein bS20: L
Small ribosomal subunit protein bS21: M - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:B
DC
ED
FE
HF
KG
LH
OI
PJ
QK
RL
TM
U
SMTL ID : 9h9l.1
Complex 3 (BODY) 30S-tRNA-GE81112
Small ribosomal subunit protein uS4
Small ribosomal subunit protein uS5
Small ribosomal subunit protein bS6, fully modified isoform
Small ribosomal subunit protein uS8
Small ribosomal subunit protein uS11
Small ribosomal subunit protein uS12
Small ribosomal subunit protein uS15
Small ribosomal subunit protein bS16
Small ribosomal subunit protein uS17
Small ribosomal subunit protein bS18
Small ribosomal subunit protein bS20
Small ribosomal subunit protein bS21
Related Entries With Identical Sequence
2ykr.1 | 3j9y.1 | 3j9z.1 | 3ja1.1 | 3jbu.1 | 3jbv.1 | 3jcd.1 | 3jce.1 | 3jcj.1 | 3jcn.1 | 4a2i.1 | 4adv.1 | 4pe9.1 | 4pea.1 | 4tol.1 | 4ton.1 | 4tou.1 | 4tow.1 | 4tp0.1 | 4tp2.1 | 4tp4.1 | 4tp6.1 | 4tp8.1 | 4tpa.1 | 4tpc.1 | 4tpe.1 | 4u1u.1 | 4u1u.2 | 4u1v.1 | 4u1v.2 more...less...4u20.1 | 4u20.2 | 4u24.1 | 4u24.2 | 4u25.1 | 4u25.2 | 4u26.1 | 4u26.2 | 4u27.1 | 4u27.2 | 4v4h.1 | 4v4h.2 | 4v4q.1 | 4v4q.2 | 4v50.1 | 4v50.2 | 4v52.1 | 4v52.2 | 4v53.1 | 4v53.2 | 4v54.1 | 4v54.2 | 4v55.1 | 4v55.2 | 4v56.1 | 4v56.2 | 4v57.1 | 4v57.2 | 4v5b.1 | 4v5b.2 | 4v5y.1 | 4v5y.2 | 4v64.1 | 4v64.2 | 4v65.1 | 4v66.1 | 4v6c.1 | 4v6c.2 | 4v6d.1 | 4v6d.2 | 4v6e.1 | 4v6e.2 | 4v6k.1 | 4v6l.1 | 4v6m.1 | 4v6n.1 | 4v6o.1 | 4v6p.1 | 4v6q.1 | 4v6r.1 | 4v6s.1 | 4v6t.1 | 4v6v.1 | 4v6y.1 | 4v6z.1 | 4v70.1 | 4v71.1 | 4v72.1 | 4v73.1 | 4v74.1 | 4v75.1 | 4v76.1 | 4v77.1 | 4v78.1 | 4v79.1 | 4v7a.1 | 4v7b.1 | 4v7c.1 | 4v7d.1 | 4v7i.1 | 4v7s.1 | 4v7t.1 | 4v7u.1 | 4v7u.2 | 4v7v.1 | 4v85.1 | 4v89.1 | 4v9c.1 | 4v9c.2 | 4v9d.1 | 4v9d.2 | 4v9o.1 | 4v9o.2 | 4v9o.3 | 4v9o.4 | 4v9p.1 | 4v9p.2 | 4v9p.3 | 4v9p.4 | 4wao.1 | 4waq.1 | 4waq.2 | 4wf1.1 | 4wf1.2 | 4woi.1 | 4woi.2 | 4www.1 | 4www.2 | 4ybb.1 | 4ybb.2 | 5afi.1 | 5h5u.1 | 5iqr.1 | 5it8.1 | 5it8.2 | 5j5b.1 | 5j5b.2 | 5j7l.1 | 5j7l.2 | 5j88.1 | 5j88.2 | 5j8a.1 | 5j8a.2 | 5j91.1 | 5j91.2 | 5jc9.1 | 5jc9.2 | 5jte.1 | 5ju8.1 | 5kcr.1 | 5kcs.1 | 5kps.1 | 5kpv.1 | 5kpw.1 | 5kpx.1 | 5l3p.1 | 5lza.1 | 5lzb.1 | 5lzc.1 | 5lzd.1 | 5lze.1 | 5lzf.1 | 5mdv.1 | 5mdw.1 | 5mdy.1 | 5mdz.1 | 5me0.1 | 5me1.1 | 5mgp.1 | 5my1.1 | 5no2.1 | 5no3.1 | 5no4.1 | 5np6.1 | 5nwy.1 | 5o2r.1 | 5u4i.1 | 5u4j.1 | 5u9f.1 | 5u9g.1 | 5uyk.1 | 5uyl.1 | 5uym.1 | 5uyn.1 | 5uyp.1 | 5uyq.1 | 5uz4.1 | 5wdt.1 | 5we4.1 | 5we6.1 | 5wf0.1 | 5wfk.1 | 5wfs.1 | 6awb.1 | 6awc.1 | 6awd.1 | 6bu8.1 | 6by1.1 | 6by1.2 | 6c4i.1 | 6dnc.1 | 6enf.1 | 6enj.1 | 6enu.1 | 6gwt.1 | 6gxm.1 | 6gxn.1 | 6gxo.1 | 6gxp.1 | 6h4n.1 | 6h58.44 | 6h58.96 | 6hrm.1 | 6lkq.1 | 6o7k.1 | 6o9j.1 | 6o9k.1 | 6ofx.1 | 6og7.1 | 6ogf.1 | 6ogg.1 | 6ogi.1 | 6om6.1 | 6ore.1 | 6orl.1 | 6osk.1 | 6osq.1 | 6ost.1 | 6ot3.1 | 6ouo.1 | 6q98.1 | 6q9a.1 | 6szs.1 | 6tbv.1 | 6tc3.1 | 6vwl.1 | 6vwm.1 | 6vwn.1 | 6vyx.12 | 6vyx.13 | 6vyx.14 | 6vyx.18 | 6vyx.19 | 6vyx.20 | 6vyx.22 | 6vyx.25 | 6vyx.26 | 6vyx.28 | 6vyx.29 | 6vyx.30 | 6w6k.1 | 6w77.1 | 6w7m.1 | 6w7n.1 | 6w7w.1 | 6wd0.1 | 6wd1.1 | 6wd2.1 | 6wd3.1 | 6wd4.1 | 6wd5.1 | 6wd6.1 | 6wd7.1 | 6wd8.1 | 6wd9.1 | 6wda.1 | 6wdb.1 | 6wdc.1 | 6wdd.1 | 6wde.1 | 6wdf.1 | 6wdg.1 | 6wdh.1 | 6wdi.1 | 6wdj.1 | 6wdk.1 | 6wdl.1 | 6wdm.1 | 6wnv.1 | 6wnw.1 | 6xe0.1 | 6xza.1 | 6xzb.1 | 6y69.1 | 6ysr.1 | 6yss.1 | 6yst.1 | 6ysu.1 | 6ztl.1 | 6ztm.1 | 6zto.1 | 6ztp.1 | 6zu1.1 | 7abz.1 | 7acj.1 | 7acr.1 | 7afi.1 | 7afl.1 | 7afo.1 | 7b5k.1 | 7bod.1 | 7boe.1 | 7bof.1 | 7bog.1 | 7boh.1 | 7boi.1 | 7cpj.1 | 7d6z.1 | 7d80.1 | 7jss.1 | 7jsw.1 | 7jsz.1 | 7jt1.1 | 7jt2.1 | 7jt3.1 | 7k00.1 | 7k50.1 | 7k51.1 | 7k52.1 | 7k53.1 | 7k54.1 | 7k55.1 | 7lv0.1 | 7m5d.1 | 7n1p.1 | 7n2c.1 | 7n2u.1 | 7n2v.1 | 7n30.1 | 7n31.1 | 7nar.1 | 7nas.1 | 7nat.1 | 7nau.1 | 7nav.1 | 7nax.1 | 7nso.1 | 7nsp.1 | 7nsq.1 | 7nwt.1 | 7nww.1 | 7o19.1 | 7o1a.1 | 7o1c.1 | 7o5h.1 | 7oe0.1 | 7oe1.1 | 7oi0.1 | 7oif.1 | 7oig.1 | 7oii.1 | 7oiz.1 | 7oj0.1 | 7ot5.1 | 7otc.1 | 7p3k.1 | 7pjs.1 | 7pjt.1 | 7pju.1 | 7pjv.1 | 7pjw.1 | 7pjx.1 | 7pjy.1 | 7pjz.1 | 7q4k.1 | 7qg8.1 | 7qgh.1 | 7qgn.1 | 7qgr.1 | 7s1g.1 | 7s1h.1 | 7s1i.1 | 7s1j.1 | 7s1k.1 | 7sa4.1 | 7ss9.1 | 7ssd.1 | 7ssl.1 | 7ssn.1 | 7sso.1 | 7ssw.1 | 7st2.1 | 7st6.1 | 7st7.1 | 7tos.1 | 7ug7.1 | 7uph.1 | 7y7c.1 | 7y7d.1 | 7y7e.1 | 7y7f.1 | 7y7g.1 | 7y7h.1 | 7zta.1 | 8a3l.1 | 8akn.1 | 8am9.1 | 8aye.1 | 8b0x.1 | 8b7y.1 | 8bd5.1 | 8bf7.1 | 8bge.1 | 8bgh.1 | 8bh4.1 | 8bhj.1 | 8bhl.1 | 8bhn.1 | 8bhp.1 | 8bil.1 | 8bim.1 | 8ca7.1 | 8cai.1 | 8cep.1 | 8cf1.1 | 8cgj.1 | 8cgr.1 | 8cgu.1 | 8ea3.1 | 8ea4.1 | 8eiu.1 | 8ekc.1 | 8emm.1 | 8eyq.1 | 8eyt.1 | 8fiz.1 | 8fto.1 | 8fzd.1 | 8fze.1 | 8fzf.1 | 8fzg.1 | 8fzh.1 | 8fzi.1 | 8fzj.1 | 8g2u.1 | 8g31.1 | 8g34.1 | 8g38.1 | 8g6w.1 | 8g7p.1 | 8g7q.1 | 8g7r.1 | 8g7s.1 | 8ghu.1 | 8hsp.1 | 8htz.1 | 8hu1.1 | 8ifb.1 | 8ifc.1 | 8jsg.1 | 8jsh.1 | 8k3o.1 | 8k4e.1 | 8p16.1 | 8p17.1 | 8p18.1 | 8peg.1 | 8phj.1 | 8pkl.1 | 8pva.1 | 8q4f.1 | 8qbt.1 | 8qk7.1 | 8qoa.1 | 8r6c.1 | 8r8m.1 | 8syl.1 | 8t5d.1 | 8t5h.1 | 8tuv.1 | 8urm.1 | 8utj.1 | 8ux8.1 | 8uxb.1 | 8uz3.1 | 8uzg.1 | 8v03.1 | 8vkv.14 | 8vkv.15 | 8vkv.16 | 8vkv.20 | 8vkv.21 | 8vkv.22 | 8vkv.24 | 8vkv.27 | 8vkv.28 | 8vkv.30 | 8vkv.31 | 8vkv.32 | 8vl1.14 | 8vl1.15 | 8vl1.16 | 8vl1.20 | 8vl1.21 | 8vl1.22 | 8vl1.24 | 8vl1.27 | 8vl1.28 | 8vl1.30 | 8vl1.31 | 8vl1.32 | 8voo.14 | 8voo.15 | 8voo.16 | 8voo.20 | 8voo.21 | 8voo.22 | 8voo.24 | 8voo.27 | 8voo.28 | 8voo.30 | 8voo.31 | 8voo.32 | 8vop.14 | 8vop.15 | 8vop.16 | 8vop.20 | 8vop.21 | 8vop.22 | 8vop.24 | 8vop.27 | 8vop.28 | 8vop.30 | 8vop.31 | 8vop.32 | 8voq.14 | 8voq.15 | 8voq.16 | 8voq.20 | 8voq.21 | 8voq.22 | 8voq.24 | 8voq.27 | 8voq.28 | 8voq.30 | 8voq.31 | 8voq.32 | 8vor.14 | 8vor.15 | 8vor.16 | 8vor.20 | 8vor.21 | 8vor.22 | 8vor.24 | 8vor.27 | 8vor.28 | 8vor.30 | 8vor.31 | 8vor.32 | 8vos.14 | 8vos.15 | 8vos.16 | 8vos.20 | 8vos.21 | 8vos.22 | 8vos.24 | 8vos.27 | 8vos.28 | 8vos.30 | 8vos.31 | 8vos.32 | 8vs9.1 | 8vsa.1 | 8vup.1 | 8vv4.1 | 8vwq.1 | 8w2n.1 | 8y5k.9 | 8y5k.10 | 8y5k.11 | 8y5k.13 | 8y5k.16 | 8y5k.17 | 8y5k.20 | 8y5k.21 | 8y5k.22 | 8y5k.23 | 8y5k.25 | 8y5k.26 | 8y5l.9 | 8y5l.10 | 8y5l.11 | 8y5l.13 | 8y5l.16 | 8y5l.17 | 8y5l.20 | 8y5l.21 | 8y5l.22 | 8y5l.23 | 8y5l.25 | 8y5l.26 | 8y5m.9 | 8y5m.10 | 8y5m.11 | 8y5m.13 | 8y5m.16 | 8y5m.17 | 8y5m.20 | 8y5m.21 | 8y5m.22 | 8y5m.23 | 8y5m.25 | 8y5m.26 | 8y5n.9 | 8y5n.10 | 8y5n.11 | 8y5n.13 | 8y5n.16 | 8y5n.17 | 8y5n.20 | 8y5n.21 | 8y5n.22 | 8y5n.23 | 8y5n.25 | 8y5n.26 | 8y5o.9 | 8y5o.10 | 8y5o.11 | 8y5o.13 | 8y5o.16 | 8y5o.17 | 8y5o.20 | 8y5o.21 | 8y5o.22 | 8y5o.23 | 8y5o.25 | 8y5o.26 | 8y5p.9 | 8y5p.10 | 8y5p.11 | 8y5p.13 | 8y5p.16 | 8y5p.17 | 8y5p.20 | 8y5p.21 | 8y5p.22 | 8y5p.23 | 8y5p.25 | 8y5p.26 | 8y5q.9 | 8y5q.10 | 8y5q.11 | 8y5q.13 | 8y5q.16 | 8y5q.17 | 8y5q.20 | 8y5q.21 | 8y5q.22 | 8y5q.23 | 8y5q.25 | 8y5q.26 | 8y5r.9 | 8y5r.10 | 8y5r.11 | 8y5r.13 | 8y5r.16 | 8y5r.17 | 8y5r.20 | 8y5r.21 | 8y5r.22 | 8y5r.23 | 8y5r.25 | 8y5r.26 | 8y5s.9 | 8y5s.10 | 8y5s.11 | 8y5s.13 | 8y5s.16 | 8y5s.17 | 8y5s.20 | 8y5s.21 | 8y5s.22 | 8y5s.23 | 8y5s.25 | 8y5s.26 | 8y5t.9 | 8y5t.10 | 8y5t.11 | 8y5t.13 | 8y5t.16 | 8y5t.17 | 8y5t.20 | 8y5t.21 | 8y5t.22 | 8y5t.23 | 8y5t.25 | 8y5t.26 | 8yuo.1 | 8yup.1 | 8yuq.1 | 8yur.1 | 8yus.1 | 8zej.1 | 8zfi.1 | 8ztu.1 | 8ztv.1 | 9ax7.1 | 9ax8.1 | 9cg5.1 | 9cg6.1 | 9cg7.1 | 9duk.1 | 9dul.1 | 9fbv.1 | 9fco.1 | 9fda.1 | 9fib.1 | 9g06.1 | 9gha.1 | 9ghb.1 | 9ghc.1 | 9ghd.1 | 9ghe.1 | 9ghf.1 | 9gr1.1 | 9gup.1 | 9guq.1 | 9gus.1 | 9gut.1 | 9guu.1 | 9guv.1 | 9guw.1 | 9gux.1 | 9gxx.1 | 9h0l.1 | 9h8g.1 | 9h9h.1 | 9h9j.1 | 9h9n.1 | 9iot.1 | 9mkk.1 | 9mor.1 | 9mq4.1 | 9n2b.1 | 9n2c.1 | 9njf.1 | 9njv.1 | 9nkl.1 | 9nl5.1 | 9nl6.1 | 9nl7.1 | 9nlb.1 | 9nle.1 | 9nlf.1 | 9nlh.1 | 9nlj.1 | 9nlq.1 | 9nls.1 | 9q87.1