8ux8.1 | SWISS-MODEL Template Library

SMTL ID : 8ux8.1

E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the +1 mRNA reading frame

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer

Ligands

395 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)

1 x LYS: LYSINE(Non-functional Binders)

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Kimbrough, E.M. et al., An RNA modification prevents extended codon-anticodon interactions from facilitating +1 frameshifting. Nat Commun (2025)

Release Date

2025-07-09

Peptides

Large ribosomal subunit protein uL1: F
50S ribosomal protein L2: G
50S ribosomal protein L3: H
50S ribosomal protein L4: I
50S ribosomal protein L5: J
50S ribosomal protein L6: K
50S ribosomal protein L9: L
Large ribosomal subunit protein uL13: M
50S ribosomal protein L14: N
50S ribosomal protein L15: O
50S ribosomal protein L16: P
50S ribosomal protein L17: Q
Large ribosomal subunit protein uL18: R
Large ribosomal subunit protein bL19: S
50S ribosomal protein L20: T
Ribosomal protein L21: U
50S ribosomal protein L22: V
50S ribosomal protein L23: W
50S ribosomal protein L24: X
Large ribosomal subunit protein bL25: Y
Large ribosomal subunit protein bL27: Z
50S ribosomal protein L28: 0
Large ribosomal subunit protein uL29: 1
50S ribosomal protein L30: 2
50S ribosomal protein L31: 3
50S ribosomal protein L32: 4
50S ribosomal protein L33: 5
50S ribosomal protein L34: 6
50S ribosomal protein L35: 7
50S ribosomal protein L36: 8
30S ribosomal protein S2: 9
30S ribosomal protein S3: a
30S ribosomal protein S4: b
30S ribosomal protein S5: c
30S ribosomal protein S6: d
30S ribosomal protein S7: e
Small ribosomal subunit protein uS8: f
Small ribosomal subunit protein uS9: g
Small ribosomal subunit protein uS10: h
30S ribosomal protein S11: i
Small ribosomal subunit protein uS12: j
30S ribosomal protein S13: k
Small ribosomal subunit protein uS14: l
Small ribosomal subunit protein uS15: m
30S ribosomal protein S16: n
Small ribosomal subunit protein uS17: o
30S ribosomal protein S18: p
Small ribosomal subunit protein uS19: q
30S ribosomal protein S20: r
30S ribosomal protein S21: s

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

F
A

G
B

H
C

I
D

J
E

K
F

L
G

M
J

N
K

O
L

P
M

Q
N

R
O

S
P

T
Q

U
R

V
S

W
T

X
U

Y
V

Z
W

0
X

1
Y

2
Z

3
a

4
b

5
c

6
d

7
e

8
f

9
g

a
h

b
i

c
j

d
k

e
l

f
m

g
n

h
o

i
p

j
q

k
r

l
s

m
t

n
u

o
v

p
w

q
x

r
y

s
z

Large ribosomal subunit protein uL1

50S ribosomal protein L2

50S ribosomal protein L3

50S ribosomal protein L4

50S ribosomal protein L5

50S ribosomal protein L6

50S ribosomal protein L9

Large ribosomal subunit protein uL13

50S ribosomal protein L14

50S ribosomal protein L15

50S ribosomal protein L16

50S ribosomal protein L17

Large ribosomal subunit protein uL18

Large ribosomal subunit protein bL19

50S ribosomal protein L20

Ribosomal protein L21

50S ribosomal protein L22

50S ribosomal protein L23

50S ribosomal protein L24

Large ribosomal subunit protein bL25

Large ribosomal subunit protein bL27

50S ribosomal protein L28

Large ribosomal subunit protein uL29

50S ribosomal protein L30

50S ribosomal protein L31

50S ribosomal protein L32

50S ribosomal protein L33

50S ribosomal protein L34

50S ribosomal protein L35

50S ribosomal protein L36

30S ribosomal protein S2

30S ribosomal protein S3

30S ribosomal protein S4

30S ribosomal protein S5

30S ribosomal protein S6

30S ribosomal protein S7

Small ribosomal subunit protein uS8

Small ribosomal subunit protein uS9

Small ribosomal subunit protein uS10

30S ribosomal protein S11

Small ribosomal subunit protein uS12

30S ribosomal protein S13

Small ribosomal subunit protein uS14

Small ribosomal subunit protein uS15

30S ribosomal protein S16

Small ribosomal subunit protein uS17

30S ribosomal protein S18

Small ribosomal subunit protein uS19

30S ribosomal protein S20

30S ribosomal protein S21

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