SMTL ID : 9ixx.1

Structural basis of the cysteinyl leukotriene receptor type 2 activation by LTD4

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-mer

Ligands

1 x LTD: (5~{S},6~{R},7~{E},9~{E},11~{Z},14~{Z})-6-[(2~{R})-2-azanyl-3-(2-hydroxy-2-oxoethylamino)-3-oxidanylidene-propyl]sulfanyl-5-oxidanyl-icosa-7,9,11,14-tetraenoic acid(Non-covalent)

LTD.1: 21 residues within 4Å: Chain E: K.37, Y.98, S.115, Y.119, Y.123, I.166, S.169, S.170, L.173, L.188, E.189, L.198, M.201, I.204, A.205, V.208, Y.263, R.267, L.271, H.284, L.287 14 PLIP interactions: 14 interactions with chain E Hydrophobic interactions: E:Y.119, E:Y.119, E:Y.119, E:Y.119, E:Y.123, E:Y.123, E:A.205, E:V.208 Hydrogen bonds: E:Y.98, E:Y.119, E:Y.119 Salt bridges: E:K.37, E:K.194, E:H.284

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jiang, M. et al., Structural basis of the cysteinyl leukotriene receptor type 2 activation by LTD4. To Be Published

Release Date

2025-04-02

Peptides

G-alpha q: A
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1: B
scFv16: C
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2: D
Cysteinyl leukotriene receptor 2: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
E

D
G

E
R

Membrane

We predict this structure to be a membrane protein.
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G-alpha q

Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

scFv16

Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2

Cysteinyl leukotriene receptor 2

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