SMTL ID : 9oim.4 (3 other biounits)

The von Hippel Lindau-ElonginB-ElonginC (VCB) complex with fragment 9

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.61 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x 01: 1-[5-[oxidanyl(oxidanylidene)-$l^{4}-azanyl]-2,3-dihydroindol-1-yl]ethanone

01.1: 8 residues within 4Å: Chain B: E.50, I.51, P.52, V.55, E.88, M.91, A.92, F.95 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:E.50, B:I.51, B:M.91, B:F.95

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Amporndanai, K. et al., NMR-Based Fragment Screen of the von Hippel-Lindau Elongin C&B Complex. Acs Med.Chem.Lett. (2025)

Release Date

2025-07-09

Peptides

Elongin-B: A
Elongin-C: B
von Hippel-Lindau disease tumor suppressor: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
J

B
K

C
L

Elongin-B

Elongin-C

von Hippel-Lindau disease tumor suppressor

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