SMTL ID : 1s1q.2 (1 other biounit)

TSG101(UEV) domain in complex with Ubiquitin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-1-1-mer

Ligands

2 x CU: COPPER (II) ION(Non-covalent)

CU.1: 3 residues within 4Å: Chain A: K.101, H.102, E.138 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.102, A:E.138, A:E.138, H2O.2, H2O.4 CU.5: 1 residues within 4Å: Chain B: D.32 4 PLIP interactions: 1 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:D.32, H2O.6, H2O.8, H2O.8

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: K.16, Y.17, R.18, D.19 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:K.16, A:R.18, A:D.19 Water bridges: A:L.20 Salt bridges: A:R.18 SO4.3: 3 residues within 4Å: Chain A: T.92, S.93 Chain B: N.60 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:S.93, B:N.60

2 x ACY: ACETIC ACID(Non-functional Binders)

ACY.4: 6 residues within 4Å: Chain A: Y.63, Y.68, I.70, P.139, P.140, V.141 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:Y.63, A:Y.68, A:P.139 Hydrogen bonds: A:V.141 ACY.6: 5 residues within 4Å: Chain B: K.27, P.38, D.39, Q.41, D.52 3 PLIP interactions: 3 interactions with chain B Water bridges: B:K.27, B:D.52 Salt bridges: B:K.27

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sundquist, W.I. et al., Ubiquitin recognition by the human TSG101 protein. Mol.Cell (2004)

Release Date

2004-05-04

Peptides

Tumor susceptibility gene 101 protein: A
ubiquitin: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Tumor susceptibility gene 101 protein

ubiquitin

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