SMTL ID : 2fif.1 (2 other biounits)

Crystal Structure of a Bovine Rabex-5 fragment complexed with ubiquitin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.49 Å

Oligo State

hetero-1-1-mer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: R.42, R.72 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.42, A:R.72

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain B: C.16, C.20, C.32, C.35 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.16, B:C.20, B:C.32, B:C.35

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lee, S. et al., Structural basis for ubiquitin recognition and autoubiquitination by Rabex-5. Nat.Struct.Mol.Biol. (2006)

Release Date

2006-02-07

Peptides

Ubiquitin: A
Rab5 GDP/GTP exchange factor: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Ubiquitin

Rab5 GDP/GTP exchange factor

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