SMTL ID : 5d0k.1 (3 other biounits)

Structure of UbE2D2:RNF165:Ub complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.65 Å

Oligo State

hetero-1-1-1-mer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain B: C.58, H.60, C.77, C.80 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.58, B:H.60, B:C.77, B:C.80 ZN.2: 4 residues within 4Å: Chain B: C.40, C.43, H.63, C.66 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.40, B:C.43, B:H.63, B:C.66

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wright, J.D. et al., Secondary ubiquitin-RING docking enhances Arkadia and Ark2C E3 ligase activity. Nat.Struct.Mol.Biol. (2016)

Release Date

2015-12-09

Peptides

Ubiquitin-conjugating enzyme E2 D2: A
RING finger protein 165: B
Polyubiquitin-B: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

C
B

Ubiquitin-conjugating enzyme E2 D2

RING finger protein 165

Polyubiquitin-B

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