SMTL ID : 4s22.1 (1 other biounit)

Crystal structure of K29 linked di-Ubiquitin

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

5 x IOD: IODIDE ION(Non-functional Binders)

IOD.1: 2 residues within 4Å: Chain A: F.45, S.65 Ligand excluded by PLIP IOD.2: 2 residues within 4Å: Chain A: R.72, L.73 Ligand excluded by PLIP IOD.3: 1 residues within 4Å: Chain A: L.71 Ligand excluded by PLIP IOD.4: 3 residues within 4Å: Chain B: L.8, V.70, L.71 Ligand excluded by PLIP IOD.5: 2 residues within 4Å: Chain B: I.44, G.47 Ligand excluded by PLIP

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.6: 2 residues within 4Å: Chain B: A.46, K.48 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:A.46

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kristariyanto, Y.A. et al., K29-selective ubiquitin binding domain reveals structural basis of specificity and heterotypic nature of k29 polyubiquitin. Mol.Cell (2015)

Release Date

2015-04-08

Peptides

Ubiquitin: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Ubiquitin

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