SMTL ID : 3dx8.1

Crystal Structure of B*4405 presenting a 10mer EBV epitope

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

hetero-1-1-1-mer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: W.133, T.134, A.135, D.137, Q.141, Q.144 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:W.133, A:A.135, A:Q.141, A:Q.144, A:Q.144 GOL.2: 4 residues within 4Å: Chain B: T.86, L.87, S.88, Q.89 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:S.88, B:S.88, B:Q.89, B:Q.89

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Archbold, J.K. et al., Natural micropolymorphism in human leukocyte antigens provides a basis for genetic control of antigen recognition. J.Exp.Med. (2009)

Release Date

2009-01-27

Peptides

HLA class I histocompatibility complex HLA-B*4405: A
Beta-2-microglobulin: B
EBV decapeptide epitope: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

HLA class I histocompatibility complex HLA-B*4405

Beta-2-microglobulin

EBV decapeptide epitope

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