- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.18 Å
- Oligo State
- hetero-1-1-1-mer
- Ligands
- 7 x ACY: ACETIC ACID(Non-functional Binders)
ACY.1: 8 residues within 4Å:- Chain A: W.204, R.234, Q.242
- Chain B: Y.10, S.11, H.13, P.14, R.97
4 PLIP interactions:3 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:S.11, B:S.11
- Water bridges: B:A.15
- Salt bridges: A:R.234
ACY.2: 4 residues within 4Å:- Chain A: Q.226, D.227, T.228, E.229
2 PLIP interactions:2 interactions with chain A- Water bridges: A:D.227, A:E.229
ACY.3: 2 residues within 4Å:- Chain A: D.196, H.197
1 PLIP interactions:1 interactions with chain A- Salt bridges: A:H.197
ACY.4: 4 residues within 4Å:- Chain A: S.92, H.93, D.119
- Chain B: I.1
4 PLIP interactions:3 interactions with chain B, 1 interactions with chain A- Hydrophobic interactions: B:I.1
- Hydrogen bonds: B:I.1
- Water bridges: B:Q.2, A:I.94
ACY.5: 2 residues within 4Å:- Chain A: Y.85, Q.87
2 PLIP interactions:2 interactions with chain A- Hydrophobic interactions: A:Y.85
- Hydrogen bonds: A:Q.87
ACY.6: 3 residues within 4Å:- Chain A: R.6, D.102
- Chain B: K.58
5 PLIP interactions:1 interactions with chain B, 4 interactions with chain A- Salt bridges: B:K.58, A:R.6
- Water bridges: A:S.4, A:S.4, A:R.6
ACY.7: 4 residues within 4Å:- Chain A: R.35, E.46, P.47, R.48
3 PLIP interactions:3 interactions with chain A- Water bridges: A:R.48
- Salt bridges: A:R.35, A:R.48
- 1 x GOL: GLYCEROL(Non-functional Binders)
GOL.8: 9 residues within 4Å:- Chain A: S.131, S.132, W.133, W.147, E.148, R.151, V.152, A.153, E.154
7 PLIP interactions:7 interactions with chain A- Hydrogen bonds: A:W.133, A:R.151, A:V.152, A:A.153, A:E.154
- Water bridges: A:E.148, A:E.148
- 8 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
PEG.9: 8 residues within 4Å:- Chain A: S.4, M.5, R.6, F.8, Y.27, D.29
- Chain B: K.58
- Ligands: PEG.15
4 PLIP interactions:3 interactions with chain A, 1 interactions with chain B- Hydrogen bonds: A:S.4, A:D.29
- Water bridges: A:S.4, B:K.58
PEG.10: 10 residues within 4Å:- Chain A: Y.9, N.70, Y.74, R.97, R.156
- Chain C: E.3, P.4, P.6, L.10
- Ligands: PEG.16
6 PLIP interactions:5 interactions with chain A, 1 interactions with chain C- Hydrogen bonds: A:Y.74, A:Y.74, A:R.97, C:P.4
- Water bridges: A:N.70, A:N.70
PEG.11: 4 residues within 4Å:- Chain A: R.145, E.148, A.149, R.151
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:R.151
PEG.12: 7 residues within 4Å:- Chain A: A.211, T.233, F.241
- Chain B: Y.26, S.57, Y.63
- Ligands: PEG.15
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:T.233
PEG.13: 8 residues within 4Å:- Chain A: S.2, H.3, D.29, L.179, Y.209, P.210, E.212, E.264
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:R.181
- Water bridges: A:G.1, A:E.212, A:E.264
PEG.14: 6 residues within 4Å:- Chain A: R.44, T.45, P.47, W.60, D.61, T.64
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:D.61, A:D.61, A:T.64
- Water bridges: A:W.60
PEG.15: 10 residues within 4Å:- Chain A: F.8, Y.27, D.29, D.30
- Chain B: F.56, S.57, K.58, Y.63
- Ligands: PEG.9, PEG.12
3 PLIP interactions:2 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:S.57, A:D.30
- Water bridges: B:K.58
PEG.16: 6 residues within 4Å:- Chain A: V.152, R.156
- Chain C: L.10, T.11, Y.13
- Ligands: PEG.10
4 PLIP interactions:2 interactions with chain A, 2 interactions with chain C- Hydrogen bonds: A:R.156, C:T.11, C:T.11
- Water bridges: A:S.77
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Burrows, S.R. et al., Hard wiring of T cell receptor specificity for the major histocompatibility complex is underpinned by TCR adaptability. Proc.Natl.Acad.Sci.USA (2010)
- Release Date
- 2010-06-09
- Peptides
- HLA class I histocompatibility antigen, B-35 alpha chain: A
Beta-2-microglobulin: B
peptide from Trans-activator protein BZLF1: C - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C
SMTL ID : 3kww.1
Crystal structure of the 'restriction triad' mutant of HLA B*3508, beta-2-microglobulin and EBV peptide
HLA class I histocompatibility antigen, B-35 alpha chain
Beta-2-microglobulin
peptide from Trans-activator protein BZLF1
Related Entries With Identical Sequence
1a1m.1 | 1a1n.1 | 1a1o.1 | 1a6z.1 | 1a6z.2 | 1agb.1 | 1agc.1 | 1agd.1 | 1age.1 | 1agf.1 | 1akj.1 | 1c16.1 | 1c16.2 | 1c16.3 | 1c16.4 | 1c16.5 | 1de4.1 | 1de4.2 | 1e27.1 | 1e28.1 | 1exu.1 | 1hsa.1 | 1hsa.2 | 1hsb.1 | 1m05.1 | 1m05.2 | 1m6o.1 | 1mi5.1 | 1n2r.1 | 1onq.1 more...less...1onq.2 | 1p7q.1 | 1qlf.1 | 1r3h.1 | 1r3h.2 | 1r3h.3 | 1r3h.4 | 1s8d.1 | 1t1w.1 | 1t1x.1 | 1t1y.1 | 1t1z.1 | 1t20.1 | 1t21.1 | 1t22.1 | 1vgk.1 | 1x7q.1 | 1xh3.1 | 1xr8.1 | 1xr9.1 | 1xz0.1 | 1xz0.2 | 1zhk.1 | 1zhl.1 | 1zs8.1 | 1zs8.2 | 1zs8.3 | 1zs8.4 | 1zs8.5 | 1zs8.6 | 1zsd.1 | 1zvs.1 | 1zvs.2 | 2ak4.1 | 2ak4.2 | 2ak4.3 | 2ak4.4 | 2axf.1 | 2axg.1 | 2cii.1 | 2cik.1 | 2fyy.1 | 2fz3.1 | 2h26.1 | 2h6p.1 | 2hjk.1 | 2hjl.1 | 2hla.1 | 2hn7.1 | 2nw3.1 | 2nx5.1 | 2nx5.2 | 2nx5.3 | 2nx5.4 | 2po6.1 | 2po6.2 | 2rfx.1 | 2xks.1 | 2ypk.1 | 2ypl.1 | 3c9n.1 | 3d2u.1 | 3d2u.2 | 3dbx.1 | 3dx6.1 | 3dx7.1 | 3dx8.1 | 3dxa.1 | 3dxa.2 | 3dxa.3 | 3hla.1 | 3huj.1 | 3huj.2 | 3kpl.1 | 3kpm.1 | 3kpn.1 | 3kpp.1 | 3kpq.1 | 3kpr.1 | 3kpr.2 | 3kps.1 | 3kxf.1 | 3kxf.2 | 3kxf.3 | 3kxf.4 | 3l3d.1 | 3l3g.1 | 3l3i.1 | 3l3j.1 | 3l3k.1 | 3ln4.1 | 3ln5.1 | 3m17.2 | 3m17.4 | 3m17.6 | 3m17.8 | 3m1b.2 | 3m1b.4 | 3m1b.6 | 3m1b.8 | 3mv7.1 | 3rew.1 | 3rew.2 | 3rl2.1 | 3sdx.1 | 3sdx.2 | 3spv.1 | 3t8x.1 | 3t8x.2 | 3tid.1 | 3tie.1 | 3tie.2 | 3tzv.1 | 3upr.1 | 3upr.2 | 3vcl.1 | 3vfm.1 | 3vfn.1 | 3vfo.1 | 3vfp.1 | 3vfs.1 | 3vfw.1 | 3vh8.1 | 3vh8.2 | 3vwj.1 | 3vwk.1 | 3x11.1 | 3x12.1 | 3x13.1 | 3x14.1 | 4g8i.1 | 4g9d.1 | 4gup.1 | 4gup.2 | 4hwz.1 | 4hx1.1 | 4i48.1 | 4jqv.1 | 4jqx.1 | 4jrx.1 | 4jry.1 | 4k71.1 | 4k71.2 | 4k71.3 | 4l4t.1 | 4l4t.2 | 4l4v.1 | 4l4v.2 | 4lcw.1 | 4lcw.2 | 4lnr.1 | 4mji.1 | 4mji.2 | 4n0f.1 | 4n0f.2 | 4n0f.3 | 4n0f.4 | 4n0u.1 | 4nnx.1 | 4nny.1 | 4no0.1 | 4no2.1 | 4no3.1 | 4nqc.1 | 4nqc.2 | 4nqd.1 | 4nqd.2 | 4nqd.5 | 4nqe.1 | 4nqe.2 | 4o2c.1 | 4o2e.1 | 4o2e.2 | 4o2f.1 | 4o2f.2 | 4pj7.1 | 4pj7.2 | 4pj8.1 | 4pr5.1 | 4pra.1 | 4prb.1 | 4prd.1 | 4pre.1 | 4pri.1 | 4prn.1 | 4prp.1 | 4qrr.1 | 4qru.1 | 4uq2.1 | 4uq2.2 | 4wu7.1 | 4wu7.2 | 4ww2.1 | 4x6d.1 | 4x6d.2 | 5b38.1 | 5b39.1 | 5bjt.1 | 5bjt.2 | 5bjt.3 | 5bjt.4 | 5ddh.1 | 5enw.1 | 5f1i.1 | 5f1i.2 | 5f1i.3 | 5f1i.4 | 5f1i.5 | 5f1i.6 | 5f1i.7 | 5f1i.8 | 5f7d.1 | 5fa3.1 | 5gr7.1 | 5grd.1 | 5grg.1 | 5gsb.1 | 5gsd.1 | 5gsv.1 | 5gsx.1 | 5gsx.2 | 5im7.1 | 5im7.2 | 5inc.1 | 5inc.2 | 5ind.1 | 5ind.2 | 5nmh.1 | 5opi.1 | 5swq.1 | 5t6w.1 | 5t6x.1 | 5t6y.1 | 5t6z.1 | 5t70.1 | 5u16.1 | 5u16.2 | 5u17.1 | 5u17.2 | 5u2v.1 | 5u2v.2 | 5u6q.1 | 5u6q.2 | 5u72.1 | 5u72.2 | 5u98.1 | 5u98.2 | 5v5m.1 | 5v5m.2 | 5vud.1 | 5vue.1 | 5vuf.1 | 5vvp.1 | 5vwd.1 | 5vwf.1 | 5vwj.1 | 5wke.1 | 5wkg.1 | 5wki.1 | 5wl1.1 | 5wwj.1 | 5wwj.2 | 5wwu.1 | 5xos.1 | 5xot.1 | 6avf.1 | 6bj2.1 | 6bj3.1 | 6bj8.1 | 6bxp.1 | 6c97.1 | 6c97.2 | 6c98.1 | 6c98.2 | 6c99.1 | 6c99.2 | 6cug.1 | 6eny.1 | 6ewa.1 | 6ewa.2 | 6ewc.1 | 6ewc.2 | 6ewo.1 | 6ewo.2 | 6fgb.1 | 6ilm.1 | 6ilm.2 | 6ilm.3 | 6ilm.4 | 6j1v.1 | 6j1w.1 | 6j29.1 | 6j2a.1 | 6j2e.1 | 6j2e.2 | 6j2g.1 | 6j2g.2 | 6j2i.1 | 6j2i.2 | 6j2j.1 | 6j2j.2 | 6joz.1 | 6jp3.1 | 6k7t.1 | 6la6.1 | 6la6.2 | 6la6.3 | 6la6.4 | 6la7.1 | 6la7.2 | 6la7.3 | 6la7.4 | 6mtl.1 | 6mtm.1 | 6mwr.1 | 6nha.1 | 6o4y.1 | 6o4z.1 | 6o51.1 | 6o53.1 | 6p23.1 | 6p27.1 | 6p2c.1 | 6pbh.1 | 6pyj.1 | 6pyv.1 | 6pz5.1 | 6uln.1 | 6ulr.1 | 6uon.1 | 6uon.2 | 6vb1.1 | 6vb6.1 | 6vqy.1 | 6vqy.2 | 6vqz.1 | 6vqz.2 | 6wna.1 | 6wol.1 | 6wzy.1 | 7b5f.1 | 7c9v.1 | 7c9v.2 | 7c9v.3 | 7c9v.4 | 7edo.2 | 7kgo.1 | 7kgp.1 | 7kgq.1 | 7kgr.1 | 7kgs.1 | 7kgt.1 | 7qpd.1 | 7sif.1 | 7sih.1 | 7t0l.1 | 7t0l.2 | 7t5m.1 | 7t5m.2 | 7wkj.1 | 7wzz.1 | 7x00.1 | 7x1b.1 | 7x1c.1 | 7xf3.1 | 7yg3.1 | 8dv4.1 | 8ec5.1 | 8elg.1 | 8elh.1 | 8erx.1 | 8esh.1 | 8f5a.1 | 8f7m.1 | 8i5c.1 | 8i5c.2 | 8i5c.3 | 8i5c.4 | 8i5c.5 | 8i5c.6 | 8i5c.7 | 8i5c.8 | 8i5c.9 | 8i5c.10 | 8i5d.1 | 8i5e.1 | 8isn.1 | 8isn.2 | 8tub.1 | 8tub.2 | 8tub.3 | 8tub.4 | 8udr.1 | 8vra.1 | 8wte.1 | 8wte.2 | 8wul.1 | 8wul.2 | 8wul.3 | 8wul.4 | 8xes.1 | 8xfz.1 | 8xg2.1 | 8xkc.1 | 8ye4.1 | 8ye4.2