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SMTL ID : 4n0u.1

Ternary complex between Neonatal Fc receptor, serum albumin and Fc

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.80 Å

Oligo State

hetero-2-2-2-2-mer

Ligands

2 x NAG- NAG- BMA- MAN- NAG- MAN- NAG- FUL: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN-NAG-MAN-NAG-FUL.1:	10 residues within 4Å: Chain D: F.6, F.8, K.11, V.27, V.29, D.30, Q.60, N.62, T.64, R.66 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:K.11
NAG-NAG-BMA-MAN-NAG-MAN-NAG-FUL.2:	10 residues within 4Å: Chain H: F.6, F.8, K.11, V.27, V.29, D.30, Q.60, N.62, T.64, R.66 1 PLIP interactions: 1 interactions with chain H Hydrogen bonds: H:K.11

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Oganesyan, V. et al., Structural Insights into Neonatal Fc Receptor-based Recycling Mechanisms. J.Biol.Chem. (2014)

Release Date

2014-02-05

Peptides

IgG receptor FcRn large subunit p51: AE
Beta-2-microglobulin: BF
Serum albumin: CG
Ig gamma-1 chain C region: DH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

E
A

B
B

F
B

C
D

G
D

D
E

H
E

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

IgG receptor FcRn large subunit p51

Toggle Identical (AE)

Beta-2-microglobulin

Toggle Identical (BF)

Serum albumin

Toggle Identical (CG)

Ig gamma-1 chain C region

Toggle Identical (DH)

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