SMTL ID : 4pri.1

Crystal structure of TK3 TCR-HLA-B*35:08-HPVG complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

hetero-1-1-1-1-1-mer

Ligands

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 3 residues within 4Å: Chain A: Q.65, T.69 Chain E: A.55 Ligand excluded by PLIP CL.4: 1 residues within 4Å: Chain D: P.8 Ligand excluded by PLIP

3 x NA: SODIUM ION(Non-functional Binders)

NA.2: 2 residues within 4Å: Chain B: D.34, N.83 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.83 NA.3: 3 residues within 4Å: Chain D: P.8, E.9, A.10 3 PLIP interactions: 3 interactions with chain D Hydrogen bonds: D:E.9, D:A.10, D:A.10 NA.5: 2 residues within 4Å: Chain E: T.6, P.7 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, Y.C. et al., A Molecular Basis for the Interplay between T Cells, Viral Mutants, and Human Leukocyte Antigen Micropolymorphism. J.Biol.Chem. (2014)

Release Date

2014-04-16

Peptides

MHC class I antigen: A
Beta-2-microglobulin: B
Epstein-Barr nuclear antigen 1: C
TK3 TCR alpha chain: D
TK3 TCR beta chain: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

MHC class I antigen

Beta-2-microglobulin

Epstein-Barr nuclear antigen 1

TK3 TCR alpha chain

TK3 TCR beta chain

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