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SMTL ID : 4ww2.1
Crystal structure of human TCR Alpha Chain-TRAV21-TRAJ8, Beta Chain-TRBV7-8, Antigen-presenting glycoprotein CD1d, and Beta-2-microglobulin
Coordinates
PDB Format
Method
X-RAY DIFFRACTION
2.48 Å
Oligo State
hetero-1-1-1-1-mer
Ligands
2 x
NAG:
2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
NAG.1:
3
residues within 4Å:
Chain C:
A.20,
N.21,
W.24
No protein-ligand interaction detected (PLIP)
NAG.2:
4
residues within 4Å:
Chain C:
W.24,
T.25,
R.26,
N.43
3 PLIP interactions:
3 interactions with chain C
Hydrophobic interactions:
C:W.24
Hydrogen bonds:
C:T.25,
C:N.43
1 x
JLS:
(15Z)-N-[(2S,3S,4R)-1-(alpha-D-galactopyranosyloxy)-3,4-dihydroxyoctadecan-2-yl]tetracos-15-enamide(Non-covalent)