SMTL ID : 5t6x.1

HLA-B*57:01 presenting TSTTSVASSW

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.69 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: R.6, F.8, Y.27, D.29, D.30 Chain B: Y.63 6 PLIP interactions: 3 interactions with chain B, 3 interactions with chain A Hydrogen bonds: B:S.55, B:S.55, B:Y.63, A:D.30, A:D.30 Water bridges: A:D.29

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pymm, P. et al., MHC-I peptides get out of the groove and enable a novel mechanism of HIV-1 escape. Nat. Struct. Mol. Biol. (2017)

Release Date

2017-03-01

Peptides

HLA class I histocompatibility antigen, B-57 alpha chain: A
Beta-2-microglobulin: B
Decapeptide: THR-SER-THR-THR-SER-VAL-ALA-SER-SER-TRP: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

HLA class I histocompatibility antigen, B-57 alpha chain

Beta-2-microglobulin

Decapeptide: THR-SER-THR-THR-SER-VAL-ALA-SER-SER-TRP

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