SMTL ID : 5t6z.1

KIR3DL1 in complex with HLA-B*57:01-TW10

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-1-1-1-1-mer

Ligands

3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 3 residues within 4Å: Chain D: E.42, N.71, Y.183 2 PLIP interactions: 2 interactions with chain D Hydrogen bonds: D:N.71, D:Y.183 NAG.2: 4 residues within 4Å: Chain D: H.108, Q.122, K.156, N.158 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:Q.122 NAG.3: 3 residues within 4Å: Chain D: N.252, T.254, Q.256 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:T.254

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pymm, P. et al., MHC-I peptides get out of the groove and enable a novel mechanism of HIV-1 escape. Nat. Struct. Mol. Biol. (2017)

Release Date

2017-03-01

Peptides

HLA class I histocompatibility antigen, B-57 alpha chain: A
Beta-2-microglobulin: B
Decapeptide: THR-SER-THR-LEU-GLN-GLU-GLN-ILE-GLY-TRP: C
Killer cell immunoglobulin-like receptor 3DL1: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
G

HLA class I histocompatibility antigen, B-57 alpha chain

Beta-2-microglobulin

Decapeptide: THR-SER-THR-LEU-GLN-GLU-GLN-ILE-GLY-TRP

Killer cell immunoglobulin-like receptor 3DL1

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