SMTL ID : 6eny.1

Structure of the human PLC editing module

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY 5.80 Å

Oligo State

hetero-1-1-1-1-1-mer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 7 residues within 4Å: Chain D: Y.85, N.86, Q.87, S.88 Chain E: C.120, G.121, P.122 2 PLIP interactions: 2 interactions with chain E Hydrogen bonds: E:C.120, E:P.122

1 x MAN- MAN- MAN- BGC: beta-D-glucopyranose-(1-3)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose

MAN-MAN-MAN-BGC.2: 8 residues within 4Å: Chain E: G.89, G.90, G.107, I.119, C.120, D.300, L.301, W.302 1 PLIP interactions: 1 interactions with chain E Hydrogen bonds: E:G.107

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Blees, A. et al., Structure of the human MHC-I peptide-loading complex. Nature (2017)

Release Date

2017-11-29

Peptides

Beta-2-microglobulin: A
Tapasin: B
Protein disulfide-isomerase A3: C
HLA class I histocompatibility antigen, A-3 alpha chain: D
Calreticulin: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

C
D

D
F

E
G

Beta-2-microglobulin

Tapasin

Protein disulfide-isomerase A3

HLA class I histocompatibility antigen, A-3 alpha chain

Calreticulin

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