SMTL ID : 6j1v.1

The structure of HLA-A*3003/RT313

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ALA- ILE- PHE- GLN- SER- SER- MET- THR- LYS: RT313(Non-covalent)

ALA-ILE-PHE-GLN-SER-SER-MET-THR-LYS.1: 25 residues within 4Å: Chain A: M.5, Y.7, E.63, N.66, V.67, H.70, T.73, E.76, N.77, T.80, L.81, Y.84, I.95, Y.99, H.116, T.143, K.146, W.147, A.150, R.152, Q.155, L.156, Y.159, W.167, Y.171 26 PLIP interactions: 26 interactions with chain A Hydrophobic interactions: A:Y.7, A:N.66, A:V.67, A:L.81, A:Y.99, A:T.143, A:W.147, A:L.156, A:Y.159, A:Y.159, A:Y.159, A:W.167 Hydrogen bonds: A:E.63, A:N.77, A:N.77, A:Y.84, A:Y.99, A:H.116, A:K.146, A:K.146, A:R.152, A:Y.171, A:Y.171 Water bridges: A:N.66, A:H.70 Salt bridges: A:K.146

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhu, S. et al., Divergent Peptide Presentations of HLA-A*30 Alleles Revealed by Structures With Pathogen Peptides. Front Immunol (2019)

Release Date

2019-09-25

Peptides

HLA-A*3003: A
Beta-2-microglobulin: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

HLA-A*3003

Beta-2-microglobulin

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