SMTL ID : 6j2a.1

The structure of HLA-A*3003/NP44

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

hetero-1-1-mer

Ligands

1 x CYS- THR- GLU- LEU- LYS- LEU- SER- ASP- TYR: NP44(Non-covalent)

CYS-THR-GLU-LEU-LYS-LEU-SER-ASP-TYR.1: 28 residues within 4Å: Chain A: M.5, Y.7, M.45, Q.62, E.63, N.66, H.70, T.73, E.76, N.77, T.80, L.81, Y.84, I.95, I.97, Y.99, E.114, H.116, Y.123, T.143, K.146, W.147, R.152, L.156, Y.159, T.163, W.167, Y.171 24 PLIP interactions: 24 interactions with chain A Hydrophobic interactions: A:Y.7, A:N.77, A:L.81, A:I.95, A:Y.99, A:Y.123, A:T.143, A:W.147, A:Y.159 Hydrogen bonds: A:E.63, A:N.66, A:N.77, A:N.77, A:Y.99, A:T.143, A:W.147, A:Y.159, A:Y.171 Water bridges: A:W.147, A:R.152, A:R.152, A:R.152 Salt bridges: A:K.146, A:R.152

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhu, S. et al., Divergent Peptide Presentations of HLA-A*30 Alleles Revealed by Structures With Pathogen Peptides. Front Immunol (2019)

Release Date

2019-09-25

Peptides

HLA-A*3003: A
Beta-2-microglobulin: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

HLA-A*3003

Beta-2-microglobulin

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