SMTL ID : 8erx.1

Structure of chimeric HLA-A*11:01-A*02:01 bound to HIV-1 RT peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.07 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ALA- ILE- PHE- GLN- SER- SER- MET- THR- LYS: HIV-1 RT(Non-covalent)

ALA-ILE-PHE-GLN-SER-SER-MET-THR-LYS.1: 22 residues within 4Å: Chain A: Y.7, Q.62, E.63, N.66, V.67, Q.70, D.77, L.81, Y.84, Y.99, R.114, D.116, Y.123, T.143, K.146, W.147, A.150, Q.155, L.156, Y.159, W.167, Y.171 28 PLIP interactions: 28 interactions with chain A Hydrophobic interactions: A:Y.7, A:N.66, A:Y.99, A:Y.123, A:T.143, A:W.147, A:L.156, A:L.156, A:Y.159, A:Y.159, A:W.167 Hydrogen bonds: A:Y.7, A:E.63, A:N.66, A:Q.70, A:Q.70, A:D.77, A:D.77, A:Y.99, A:Y.99, A:R.114, A:R.114, A:D.116, A:K.146, A:Q.155, A:Y.159, A:Y.171 Water bridges: A:Q.70

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Papadaki, G.F. et al., Decoupling peptide binding from T cell receptor recognition with engineered chimeric MHC-I molecules. Front Immunol (2023)

Release Date

2023-01-25

Peptides

HLA-A*02:01: A
Beta-2-microglobulin: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

HLA-A*02:01

Beta-2-microglobulin

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