SMTL ID : 8esh.1

Structure of chimeric HLA-A*02:01 bound to CMV peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.72 Å

Oligo State

hetero-1-1-mer

Ligands

1 x GLU- LEU- ASN- ARG- LYS- MET- ILE- TYR- MET: CMV peptide(Non-covalent)

GLU-LEU-ASN-ARG-LYS-MET-ILE-TYR-MET.1: 32 residues within 4Å: Chain A: M.4, Y.6, D.8, S.23, F.35, Y.58, R.61, N.62, I.65, F.66, N.69, T.72, D.73, E.75, S.76, N.79, Y.83, L.94, S.96, Y.98, N.115, Y.122, T.142, K.145, W.146, A.149, V.151, D.155, Y.158, T.162, W.166, Y.170 30 PLIP interactions: 30 interactions with chain A Hydrophobic interactions: A:Y.6, A:F.35, A:F.66, A:N.69, A:T.72, A:E.75, A:E.75, A:Y.98, A:A.149, A:V.151, A:Y.158, A:T.162, A:W.166 Hydrogen bonds: A:D.8, A:D.8, A:N.62, A:N.62, A:N.69, A:N.69, A:Q.71, A:S.76, A:N.79, A:S.96, A:Y.98, A:T.142, A:D.155, A:Y.158, A:Y.170 Salt bridges: A:R.61, A:K.145

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Papadaki, G.F. et al., Decoupling peptide binding from T cell receptor recognition with engineered chimeric MHC-I molecules. Front Immunol (2023)

Release Date

2023-01-25

Peptides

HLA-A*02:01: A
Beta-2-microglobulin: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

HLA-A*02:01

Beta-2-microglobulin

Related Entries With Identical Sequence