SMTL ID : 1h9z.1

Human Serum Albumin Complexed With Myristic Acid and the R-(+) enantiomer of warfarin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

6 x MYR: MYRISTIC ACID(Non-covalent)

MYR.1: 8 residues within 4Å: Chain A: R.117, M.123, Y.138, L.139, I.142, A.158, Y.161, F.165 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:Y.138, A:Y.138, A:I.142, A:A.158, A:Y.161, A:Y.161, A:Y.161, A:F.165 Salt bridges: A:R.117, A:R.186 MYR.2: 8 residues within 4Å: Chain A: L.22, L.66, Y.150, L.251, A.254, R.257, L.284, S.287 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.22, A:L.66, A:L.251, A:A.254 Hydrogen bonds: A:Y.150, A:S.287, A:S.287 Water bridges: A:R.257, A:H.288 Salt bridges: A:R.257 MYR.3: 11 residues within 4Å: Chain A: S.342, V.344, R.348, I.388, N.391, V.433, G.434, C.438, A.449, L.453, R.485 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:N.391, A:A.449 Hydrogen bonds: A:S.342, A:S.342 Salt bridges: A:R.348, A:R.485 MYR.4: 13 residues within 4Å: Chain A: L.387, R.410, Y.411, V.415, V.418, T.422, L.423, V.426, L.457, L.460, R.485, F.488, S.489 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:Y.411, A:Y.411, A:V.415, A:V.418, A:V.418, A:T.422, A:V.426, A:L.457, A:L.460, A:F.488, A:F.488 Hydrogen bonds: A:Y.411, A:Y.411 Salt bridges: A:R.410, A:K.414 MYR.5: 12 residues within 4Å: Chain A: Y.401, N.405, F.502, F.507, K.525, A.528, L.529, V.547, F.551, A.552, S.579, Q.580 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:F.502, A:F.507, A:A.528, A:L.529, A:V.547, A:Q.580 Hydrogen bonds: A:Y.401 Salt bridges: A:K.525 MYR.6: 5 residues within 4Å: Chain A: R.209, D.324, L.327, L.347, K.351 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:L.327

1 x RWF: R-WARFARIN(Non-covalent)

RWF.7: 11 residues within 4Å: Chain A: F.211, W.214, A.215, L.219, R.222, L.238, H.242, R.257, L.260, S.287, A.291 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:F.211, A:A.215, A:L.238, A:L.238, A:L.260 Hydrogen bonds: A:R.222 Salt bridges: A:R.222 pi-Stacking: A:W.214

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Petitpas, I. et al., Crystal Structure Analysis of Warfarin Binding to Human Serum Albumin: Anatomy of Drug Site I. J.Biol.Chem. (2001)

Release Date

2001-06-20

Peptides

SERUM ALBUMIN: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

SERUM ALBUMIN

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