SMTL ID : 7vr9.2 (1 other biounit)

Crystal structure of human serum albumin complex with aripiprazole and myristic acid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

6 x MYR: MYRISTIC ACID(Non-covalent)

MYR.1: 9 residues within 4Å: Chain A: R.209, A.210, A.213, V.216, D.324, L.327, G.328, A.350, E.354 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:V.216, A:D.324, A:L.327, A:A.350 MYR.2: 9 residues within 4Å: Chain A: L.14, Y.150, P.152, L.251, A.254, A.258, L.283, L.284, S.287 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:L.14, A:P.152, A:L.251 Hydrogen bonds: A:Y.150, A:S.287 Water bridges: A:S.287, A:S.287, A:S.287 MYR.3: 11 residues within 4Å: Chain A: S.342, V.344, R.348, P.384, I.388, N.391, V.433, G.434, L.453, R.485 Ligands: MYR.4 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:P.384, A:V.433, A:L.453 Hydrogen bonds: A:S.342, A:S.342 Salt bridges: A:R.348, A:R.485 MYR.4: 10 residues within 4Å: Chain A: N.391, Y.411, V.415, L.423, L.453, L.457, L.460, F.488, S.489 Ligands: MYR.3 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:Y.411, A:Y.411, A:Y.411, A:V.415, A:L.423, A:L.453, A:L.457, A:L.460, A:F.488, A:F.488 Hydrogen bonds: A:N.391, A:Y.411, A:S.489 MYR.5: 11 residues within 4Å: Chain A: Y.401, N.405, F.502, F.507, K.525, L.532, V.547, M.548, F.551, V.576, S.579 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:F.502, A:K.525, A:K.525, A:L.532, A:V.547, A:F.551, A:F.551, A:F.551, A:V.576 Hydrogen bonds: A:Y.401, A:Y.401 Salt bridges: A:K.525 MYR.6: 13 residues within 4Å: Chain A: K.199, W.214, R.218, L.219, R.222, L.238, V.241, H.242, R.257, I.264, S.287, I.290, A.291 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:W.214, A:R.218, A:L.219, A:L.238, A:L.238, A:I.264, A:I.290, A:A.291 Salt bridges: A:H.242, A:R.257

1 x 9SC: 7-[4-[4-[2,3-bis(chloranyl)phenyl]piperazin-1-yl]butoxy]-3,4-dihydro-1H-quinolin-2-one(Non-covalent)

9SC.7: 16 residues within 4Å: Chain A: L.115, V.116, R.117, P.118, M.123, Y.138, I.142, H.146, L.154, F.157, Y.161, F.165, R.186, G.189, K.190, S.193 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:L.115, A:R.117, A:F.165 Halogen bonds: A:Y.161

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hirata, K. et al., Effects of Myristate on the Induced Circular Dichroism Spectra of Aripiprazole Bound to Human Serum Albumin: A Structural-Chemical Investigation. Acs Omega (2022)

Release Date

2022-02-16

Peptides

Serum albumin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Serum albumin

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