SMTL ID : 4uz6.1 (1 other biounit)

STRUCTURE OF THE WNT DEACYLASE NOTUM - CRYSTAL FORM V - SOS COMPLEX - 1.9A

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x GU4- YYJ: 1,3,4,6-tetra-O-sulfo-beta-D-fructofuranose-(2-1)-2,3,4,6-tetra-O-sulfonato-alpha-D-glucopyranose(Non-covalent)

GU4-YYJ.1: 11 residues within 4Å: Chain A: G.39, S.40, R.41, R.42, N.97, K.147, V.148, H.335, D.338, R.339, H.342 15 PLIP interactions: 15 interactions with chain A Water bridges: A:R.42, A:R.42, A:H.342, A:R.41, A:R.41, A:R.42, A:R.183, A:R.339, A:R.339 Salt bridges: A:R.41, A:R.41, A:K.147, A:K.147, A:H.342, A:H.342, A:R.42, A:H.335, A:R.339, A:R.339, A:H.342, A:H.342 Hydrogen bonds: A:G.39, A:N.97, A:N.97

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 6 residues within 4Å: Chain A: N.19, S.21, V.22, S.116, L.129, R.136 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.19, A:R.136

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 3 residues within 4Å: Chain A: R.13, H.15, R.141 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kakugawa, S. et al., Notum Deacylates Wnt Proteins to Suppress Signalling Activity. Nature (2015)

Release Date

2015-02-25

Peptides

PROTEIN NOTUM HOMOLOG: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PROTEIN NOTUM HOMOLOG

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