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SMTL ID : 7bck.1

Notum Fragment 791

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1:	4 residues within 4Å: Chain A: T.65, M.66, R.67, R.68 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.67, A:R.68 Water bridges: A:D.74 Salt bridges: A:R.68
SO4.2:	5 residues within 4Å: Chain A: R.56, K.120, N.121, E.122, Y.220 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.122 Salt bridges: A:R.56

1 x T9B: (2S)-N-(4-Methoxybenzyl)tetrahydrofuran-2-carboxamide(Non-covalent)

T9B.3:

12 residues within 4Å:

Chain A: Y.52, F.191, L.192, D.193, N.194, P.210, I.214, F.242, F.243, Q.266, V.269, D.270

6 PLIP interactions:

6 interactions with chain A

Hydrophobic interactions: A:I.214, A:F.242, A:F.243, A:V.269, A:V.269
Hydrogen bonds: A:Y.52

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Zhao, Y. et al., Structural Analysis and Development of Notum Fragment Screening Hits. Acs Chem Neurosci (2022)

Release Date

2022-01-12

Peptides

Palmitoleoyl-protein carboxylesterase NOTUM: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

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3D Viewer
NGLPV2D

Palmitoleoyl-protein carboxylesterase NOTUM

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