- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-1-1-1-1-mer
- Ligands
- 34 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)
MG.1: 5 residues within 4Å:- Chain A: G.738, A.739, U.1778, U.1779, A.1784
No protein-ligand interaction detected (PLIP)MG.2: 3 residues within 4Å:- Chain A: C.740, A.1783, A.1784
No protein-ligand interaction detected (PLIP)MG.3: 3 residues within 4Å:- Chain A: C.944, A.945, C.946
No protein-ligand interaction detected (PLIP)MG.4: 1 residues within 4Å:- Chain A: A.945
No protein-ligand interaction detected (PLIP)MG.5: 4 residues within 4Å:- Chain A: A.947, C.948, G.962, U.963
No protein-ligand interaction detected (PLIP)MG.6: 5 residues within 4Å:- Chain A: A.1664, A.1665, G.1666, G.1667, G.1992
No protein-ligand interaction detected (PLIP)MG.7: 3 residues within 4Å:- Chain A: C.1670, U.1671, G.2550
No protein-ligand interaction detected (PLIP)MG.8: 3 residues within 4Å:- Chain A: A.1672, G.1673, U.2552
No protein-ligand interaction detected (PLIP)MG.9: 1 residues within 4Å:- Chain A: A.1676
No protein-ligand interaction detected (PLIP)MG.10: 2 residues within 4Å:- Chain A: A.1678, A.1679
No protein-ligand interaction detected (PLIP)MG.11: 3 residues within 4Å:- Chain A: A.1780, U.1782, A.1783
No protein-ligand interaction detected (PLIP)MG.12: 3 residues within 4Å:- Chain A: A.1938, C.1957, C.1958
No protein-ligand interaction detected (PLIP)MG.13: 3 residues within 4Å:- Chain A: G.1835, A.1900, A.1970
No protein-ligand interaction detected (PLIP)MG.14: 2 residues within 4Å:- Chain A: U.2028, A.2033
No protein-ligand interaction detected (PLIP)MG.15: 2 residues within 4Å:- Chain A: G.2056, G.2057
No protein-ligand interaction detected (PLIP)MG.16: 3 residues within 4Å:- Chain A: G.2061, C.2501, G.2502
No protein-ligand interaction detected (PLIP)MG.17: 4 residues within 4Å:- Chain A: U.2074, G.2239, U.2240
- Chain B: P.227
No protein-ligand interaction detected (PLIP)MG.18: 3 residues within 4Å:- Chain A: C.2066, C.2248, U.2249
No protein-ligand interaction detected (PLIP)MG.19: 5 residues within 4Å:- Chain A: G.2447, A.2448, A.2497, C.2498, C.2499
No protein-ligand interaction detected (PLIP)MG.20: 4 residues within 4Å:- Chain A: A.2030, A.2448, C.2498, C.2499
No protein-ligand interaction detected (PLIP)MG.21: 4 residues within 4Å:- Chain A: A.2518, U.2519, C.2540, A.2541
No protein-ligand interaction detected (PLIP)MG.22: 5 residues within 4Å:- Chain A: A.2052, G.2053, C.2575, G.2576, A.2577
No protein-ligand interaction detected (PLIP)MG.23: 3 residues within 4Å:- Chain A: G.2581, G.2582, G.2583
No protein-ligand interaction detected (PLIP)MG.24: 3 residues within 4Å:- Chain A: G.784, G.2588, A.2589
No protein-ligand interaction detected (PLIP)MG.25: 4 residues within 4Å:- Chain A: A.783, G.784, A.2589
- Chain B: A.224
No protein-ligand interaction detected (PLIP)MG.26: 1 residues within 4Å:- Chain A: U.963
No protein-ligand interaction detected (PLIP)MG.27: 1 residues within 4Å:- Chain A: G.1776
No protein-ligand interaction detected (PLIP)MG.28: 3 residues within 4Å:- Chain A: A.1969, A.1970, U.1971
No protein-ligand interaction detected (PLIP)MG.29: 3 residues within 4Å:- Chain A: G.2024, C.2025, U.2034
No protein-ligand interaction detected (PLIP)MG.30: 3 residues within 4Å:- Chain A: A.2270, G.2271, U.2272
No protein-ligand interaction detected (PLIP)MG.31: 3 residues within 4Å:- Chain A: A.2587, G.2588
- Chain B: E.236
No protein-ligand interaction detected (PLIP)MG.32: 3 residues within 4Å:- Chain A: U.2506, C.2507, G.2576
No protein-ligand interaction detected (PLIP)MG.33: 1 residues within 4Å:- Chain A: G.1959
No protein-ligand interaction detected (PLIP)MG.34: 3 residues within 4Å:- Chain A: C.787, U.790, C.791
No protein-ligand interaction detected (PLIP)- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Zeng, F. et al., Conformation of methylated GGQ in the Peptidyl Transferase Center during Translation Termination. Sci Rep (2018)
- Release Date
- 2018-02-21
- Peptides
- 50S ribosomal protein L2: B
50S ribosomal protein L3: C
50S ribosomal protein L16: D
50S ribosomal protein L27: E
Peptide chain release factor RF2: G - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:B
CC
DD
NE
XG
v
SMTL ID : 6c4h.1
Conformation of methylated GGQ in the peptidyl transferase center during translation termination (PTC region)
50S ribosomal protein L2
50S ribosomal protein L3
50S ribosomal protein L16
50S ribosomal protein L27
Peptide chain release factor RF2
Related Entries With Identical Sequence
2j28.1 | 3bbx.1 | 3j5l.1 | 3j7z.1 | 3j8g.1 | 3j9y.1 | 3j9z.1 | 3ja1.1 | 3jbu.1 | 3jbv.1 | 3jcd.1 | 3jce.1 | 3jcj.1 | 3jcn.1 | 4csu.1 | 4peb.1 | 4pec.1 | 4tom.1 | 4too.1 | 4tov.1 | 4tox.1 | 4tp1.1 | 4tp3.1 | 4tp5.1 | 4tp7.1 | 4tp9.1 | 4tpb.1 | 4tpd.1 | 4tpf.1 | 4u1u.1 more...less...4u1u.2 | 4u1v.1 | 4u1v.2 | 4u20.1 | 4u20.2 | 4u24.1 | 4u24.2 | 4u25.1 | 4u25.2 | 4u26.1 | 4u26.2 | 4u27.1 | 4u27.2 | 4uy8.1 | 4v4h.1 | 4v4h.2 | 4v4q.1 | 4v4q.2 | 4v4v.1 | 4v4w.1 | 4v50.1 | 4v50.2 | 4v52.1 | 4v52.2 | 4v53.1 | 4v53.2 | 4v54.1 | 4v54.2 | 4v55.1 | 4v55.2 | 4v56.1 | 4v56.2 | 4v57.1 | 4v57.2 | 4v5b.1 | 4v5b.2 | 4v5h.1 | 4v5y.1 | 4v5y.2 | 4v64.1 | 4v64.2 | 4v65.1 | 4v66.1 | 4v69.1 | 4v6c.1 | 4v6c.2 | 4v6d.1 | 4v6d.2 | 4v6e.1 | 4v6e.2 | 4v6k.1 | 4v6l.1 | 4v6m.1 | 4v6n.1 | 4v6o.1 | 4v6p.1 | 4v6q.1 | 4v6r.1 | 4v6s.1 | 4v6t.1 | 4v6v.1 | 4v6y.1 | 4v6z.1 | 4v70.1 | 4v71.1 | 4v72.1 | 4v73.1 | 4v74.1 | 4v75.1 | 4v76.1 | 4v77.1 | 4v78.1 | 4v79.1 | 4v7a.1 | 4v7b.1 | 4v7c.1 | 4v7d.1 | 4v7i.1 | 4v7s.1 | 4v7s.2 | 4v7t.1 | 4v7t.2 | 4v7u.1 | 4v7u.2 | 4v7v.1 | 4v7v.2 | 4v85.1 | 4v89.1 | 4v9c.1 | 4v9c.2 | 4v9d.1 | 4v9d.2 | 4v9o.1 | 4v9o.2 | 4v9o.3 | 4v9o.4 | 4v9p.1 | 4v9p.2 | 4v9p.3 | 4v9p.4 | 4wap.1 | 4war.1 | 4wf1.1 | 4wf1.2 | 4woi.1 | 4woi.2 | 4www.1 | 4www.2 | 4ybb.1 | 4ybb.2 | 5ady.1 | 5afi.1 | 5aka.1 | 5gad.1 | 5gae.1 | 5gaf.1 | 5gag.1 | 5gah.1 | 5h5u.1 | 5iqr.1 | 5it8.1 | 5it8.2 | 5j5b.1 | 5j5b.2 | 5j7l.1 | 5j7l.2 | 5j88.1 | 5j88.2 | 5j8a.1 | 5j8a.2 | 5j91.1 | 5j91.2 | 5jc9.1 | 5jc9.2 | 5jte.1 | 5ju8.1 | 5kcr.1 | 5kcs.1 | 5kps.1 | 5kpv.1 | 5kpw.1 | 5kpx.1 | 5l3p.1 | 5lza.1 | 5lzb.1 | 5lzc.1 | 5lzd.1 | 5lze.1 | 5lzf.1 | 5mdv.1 | 5mdw.1 | 5mdy.1 | 5mdz.1 | 5mgp.1 | 5nco.1 | 5np6.1 | 5nwy.1 | 5o2r.1 | 5u4i.1 | 5u9f.1 | 5u9g.1 | 5uyk.1 | 5uyl.1 | 5uym.1 | 5uyn.1 | 5uyp.1 | 5uyq.1 | 5wdt.1 | 5we4.1 | 5we6.1 | 5wf0.1 | 5wfk.1 | 5wfs.1 | 6bu8.1 | 6by1.1 | 6by1.2 | 6c4i.1 | 6dnc.1 | 6enf.1 | 6enj.1 | 6enu.1 | 6gbz.1 | 6gc0.1 | 6gc4.1 | 6gc6.1 | 6gc7.1 | 6gc8.1 | 6gwt.1 | 6gxm.1 | 6gxn.1 | 6gxo.1 | 6gxp.1 | 6h4n.1 | 6h58.8 | 6h58.16 | 6h58.60 | 6h58.68 | 6hrm.1 | 6i0y.1 | 6i7v.42 | 6i7v.51 | 6i7v.71 | 6i7v.80 | 6lkq.1 | 6o9j.1 | 6o9k.1 | 6ofx.1 | 6og7.1 | 6ogf.1 | 6ogg.1 | 6ogi.1 | 6om6.1 | 6ore.1 | 6orl.1 | 6osk.1 | 6osq.1 | 6ost.1 | 6ot3.1 | 6ouo.1 | 6pc5.1 | 6pc6.1 | 6pc7.1 | 6pc8.1 | 6pch.1 | 6pcq.1 | 6pcr.1 | 6pcs.1 | 6pct.1 | 6pj6.1 | 6q97.1 | 6q98.1 | 6qdw.1 | 6qul.1 | 6s0k.1 | 6szs.1 | 6tbv.1 | 6tc3.1 | 6u48.1 | 6vu3.42 | 6vu3.54 | 6vwl.1 | 6vwm.1 | 6vwn.1 | 6vyq.35 | 6vyq.40 | 6vyq.42 | 6vyq.54 | 6vyr.35 | 6vyr.40 | 6vyr.42 | 6vyr.54 | 6vys.35 | 6vys.40 | 6vys.42 | 6vys.54 | 6vyt.32 | 6vyt.37 | 6vyt.39 | 6vyt.51 | 6vyu.33 | 6vyu.38 | 6vyu.40 | 6vyu.52 | 6vyw.38 | 6vyw.40 | 6vyw.52 | 6vyx.33 | 6vyx.38 | 6vyx.40 | 6vyx.52 | 6vyy.33 | 6vyy.38 | 6vyy.40 | 6vyy.52 | 6vyz.33 | 6vyz.38 | 6vyz.40 | 6vyz.52 | 6vz2.33 | 6vz2.40 | 6vz2.52 | 6vz3.40 | 6vz3.52 | 6vz5.33 | 6vz5.38 | 6vz5.40 | 6vz5.52 | 6vz7.40 | 6vz7.52 | 6vzj.41 | 6vzj.53 | 6wd0.1 | 6wd1.1 | 6wd2.1 | 6wd3.1 | 6wd4.1 | 6wd5.1 | 6wd6.1 | 6wd7.1 | 6wd8.1 | 6wd9.1 | 6wda.1 | 6wdb.1 | 6wdc.1 | 6wdd.1 | 6wde.1 | 6wdf.1 | 6wdg.1 | 6wdh.1 | 6wdi.1 | 6wdj.1 | 6wdk.1 | 6wdl.1 | 6wdm.1 | 6wnt.1 | 6wnv.1 | 6wnw.1 | 6wyv.1 | 6x6t.37 | 6x6t.42 | 6x6t.44 | 6x6t.56 | 6x7f.37 | 6x7f.42 | 6x7f.44 | 6x7f.56 | 6x7k.37 | 6x7k.42 | 6x7k.44 | 6x7k.56 | 6x9q.37 | 6x9q.42 | 6x9q.44 | 6x9q.56 | 6xdq.37 | 6xdq.42 | 6xdq.44 | 6xdq.56 | 6xdr.36 | 6xdr.41 | 6xdr.43 | 6xdr.55 | 6xgf.36 | 6xgf.41 | 6xgf.43 | 6xgf.55 | 6xii.36 | 6xii.41 | 6xii.43 | 6xii.55 | 6xij.35 | 6xij.40 | 6xij.42 | 6xij.54 | 6xz7.1 | 6xza.1 | 6xzb.1 | 6y69.1 | 6ys3.1 | 6ysr.1 | 6yss.1 | 6yst.1 | 6ysu.1 | 6ztj.22 | 6ztj.23 | 6ztj.43 | 6ztl.1 | 6ztm.1 | 6ztn.21 | 6ztn.22 | 6ztn.40 | 6zto.1 | 6ztp.1 | 6zu1.1 | 7abz.1 | 7ac7.1 | 7acj.1 | 7acr.1 | 7b5k.1 | 7bl2.1 | 7bl3.1 | 7bl4.1 | 7bl5.1 | 7bl6.1 | 7bv8.1 | 7cpj.1 | 7d6z.1 | 7d80.1 | 7jss.1 | 7jsw.1 | 7jsz.1 | 7jt1.1 | 7jt2.1 | 7jt3.1 | 7k00.1 | 7k50.1 | 7k51.1 | 7k52.1 | 7k53.1 | 7k54.1 | 7k55.1 | 7lv0.1 | 7lvk.1 | 7m5d.1 | 7n1p.1 | 7n2c.1 | 7n2u.1 | 7n2v.1 | 7n30.1 | 7n31.1 | 7nbu.1 | 7nso.1 | 7nsq.1 | 7nwt.1 | 7nww.1 | 7o19.1 | 7o1a.1 | 7o1c.1 | 7ode.1 | 7oif.1 | 7oig.1 | 7oii.1 | 7oiz.1 | 7oj0.1 | 7ot5.1 | 7otc.1 | 7p3k.1 | 7pjs.1 | 7pjt.1 | 7pju.1 | 7pjv.1 | 7pjw.1 | 7pjx.1 | 7pjy.1 | 7pjz.1 | 7q4k.1 | 7qg8.1 | 7qgh.1 | 7qgn.1 | 7qgr.1 | 7qq3.1 | 7s1g.1 | 7s1h.1 | 7s1i.1 | 7s1j.1 | 7s1k.1 | 7sa4.1 | 7ss9.1 | 7ssd.1 | 7ssl.1 | 7ssn.1 | 7sso.1 | 7ssw.1 | 7st2.1 | 7st6.1 | 7st7.1 | 7tos.1 | 7ug7.1 | 7uph.1 | 7y7c.1 | 7y7d.1 | 7y7e.1 | 7y7f.1 | 7y7g.1 | 7y7h.1 | 7yla.1 | 7z20.1 | 7zod.1 | 7zp8.1 | 7zq5.1 | 7zq6.1 | 7zta.1 | 8a3l.1 | 8akn.1 | 8am9.1 | 8ana.1 | 8ap4.1 | 8aye.1 | 8b0x.1 | 8b7y.1 | 8bf7.1 | 8bge.1 | 8bgh.1 | 8bh4.1 | 8bhj.1 | 8bhl.1 | 8bhn.1 | 8bhp.1 | 8bil.1 | 8bim.1 | 8c8x.1 | 8c8y.1 | 8c8z.1 | 8c90.1 | 8c91.1 | 8c92.1 | 8c93.1 | 8c94.1 | 8c95.1 | 8c96.1 | 8c97.1 | 8cam.1 | 8ceu.1 | 8cgd.1 | 8cgk.1 | 8cgv.1 | 8e30.1 | 8e32.1 | 8e33.1 | 8e35.1 | 8e36.1 | 8e3l.1 | 8e3m.1 | 8e3o.1 | 8e41.1 | 8e42.1 | 8e43.1 | 8e44.1 | 8e45.1 | 8e46.1 | 8e47.1 | 8e48.1 | 8e49.1 | 8eiu.1 | 8ekc.1 | 8emm.1 | 8fiz.1 | 8fto.1 | 8g2u.1 | 8g31.1 | 8g34.1 | 8g38.1 | 8g6w.1 | 8g6x.1 | 8g6y.1 | 8g7p.1 | 8g7q.1 | 8g7r.1 | 8g7s.1 | 8hsp.1 | 8htz.1 | 8hu1.1 | 8ifb.1 | 8ifc.1 | 8j1z.1 | 8peg.1 | 8phj.1 | 8pkl.1 | 8pva.1 | 8qbt.1 | 8qoa.1 | 8r3v.44 | 8r3v.47 | 8r3v.52 | 8rcl.44 | 8rcl.47 | 8rcl.52 | 8rcm.44 | 8rcm.47 | 8rcm.52 | 8rcs.44 | 8rcs.47 | 8rcs.52 | 8rct.44 | 8rct.47 | 8rct.52 | 8syl.1