SMTL ID : 6k7t.1

Crystal structure of bat (Pteropus Alecto) MHC class I Ptal-N*01:01 in complex with Hendra virus-derived peptide HeV1--human beta-2 microglobulin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ASP- PHE- ALA- ASN- THR- PHE- LEU- PRO: HeV1(Non-covalent)

ASP-PHE-ALA-ASN-THR-PHE-LEU-PRO.1: 25 residues within 4Å: Chain A: Y.7, Y.9, Y.62, R.65, N.66, N.69, A.70, A.73, T.76, Y.77, V.79, G.80, N.83, V.84, Y.87, R.100, Y.102, T.146, K.149, W.150, Y.155, R.158, D.159, Y.162, W.170 35 PLIP interactions: 35 interactions with chain A Hydrophobic interactions: A:Y.7, A:N.66, A:A.70, A:Y.77, A:V.79, A:V.84, A:Y.102, A:W.150, A:Y.155, A:Y.155, A:Y.155, A:Y.155, A:R.158, A:Y.162 Hydrogen bonds: A:Y.7, A:N.66, A:N.66, A:N.66, A:N.69, A:N.83, A:R.100, A:R.100, A:Y.102, A:Y.102, A:Y.162, A:W.170 Water bridges: A:Y.9, A:Y.9, A:Y.62, A:Y.77, A:R.100, A:Y.155, A:R.158, A:E.166 Salt bridges: A:R.65

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lu, D. et al., Peptide presentation by bat MHC class I provides new insight into the antiviral immunity of bats. Plos Biol. (2019)

Release Date

2019-11-06

Peptides

MHC class I antigen: A
Beta-2-microglobulin: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

MHC class I antigen

Beta-2-microglobulin

Related Entries With Identical Sequence