SMTL ID : 9ht2.1

A novel bottom-up approach to find lead-compounds in billion-sized libraries

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.42 Å

Oligo State

monomer

Ligands

1 x 01: methyl 2,2,6,6-tetramethyl-4-[[2-[(5-methyl-1,3,4-thiadiazol-2-yl)amino]-2-oxidanylidene-ethyl]amino]oxane-4-carboxylate

01.1: 9 residues within 4Å: Chain A: W.40, P.41, F.42, V.46, L.51, L.53, C.95, N.99, I.105 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:F.42, A:V.46 Hydrogen bonds: A:N.99

1 x P4G: 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE(Non-covalent)

P4G.2: 4 residues within 4Å: Chain A: E.110, E.113, K.114, L.117 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:E.110 Hydrogen bonds: A:K.114 Water bridges: A:Q.118

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Serrano-Morras, A. et al., A bottom-up approach to find lead compounds in expansive chemical spaces. Commun Chem (2025)

Release Date

2025-08-13

Peptides

Bromodomain-containing protein 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain-containing protein 4

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