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SMTL ID : 2er7.1

X-RAY ANALYSES OF ASPARTIC PROTEINASES.III. THREE-DIMENSIONAL STRUCTURE OF ENDOTHIAPEPSIN COMPLEXED WITH A TRANSITION-STATE ISOSTERE INHIBITOR OF RENIN AT 1.6 ANGSTROMS RESOLUTION

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x BOC- HIS- PRO- PHE- HIS- LOV- ILE- HIS: TRANSITION-STATE ISOSTERE INHIBITOR OF RENIN(Non-covalent)

BOC-HIS-PRO-PHE-HIS-LOV-ILE-HIS.1:

30 residues within 4Å:

Chain A: I.10, L.13, D.15, A.16, D.33, D.35, G.37, I.77, S.78, Y.79, G.80, D.81, S.83, D.119, I.122, L.125, L.133, T.135, I.217, D.219, G.221, T.222, T.223, F.280, G.281, P.282, I.283, F.291, I.300, I.304

28 PLIP interactions:

28 interactions with chain A

Hydrophobic interactions: A:I.10, A:L.13, A:D.15, A:A.16, A:I.77, A:Y.79, A:I.122, A:L.125, A:L.133, A:T.135, A:I.217, A:F.280, A:F.291
Hydrogen bonds: A:D.15, A:D.35, A:G.37, A:S.78, A:S.78, A:G.80, A:D.81, A:G.221, A:T.222, A:T.223, A:T.223, A:T.223
Water bridges: A:S.78, A:S.78, A:L.224

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.2:	3 residues within 4Å: Chain A: Y.179, S.182, I.183 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.179, A:G.181, A:I.183
SO4.3:	2 residues within 4Å: Chain A: S.113, S.114 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.114 Water bridges: A:S.115
SO4.4:	2 residues within 4Å: Chain A: S.137, P.138 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.137 Water bridges: A:T.74, A:S.137

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Veerapandian, B. et al., X-ray analyses of aspartic proteinases. III Three-dimensional structure of endothiapepsin complexed with a transition-state isostere inhibitor of renin at 1.6 A resolution. J.Mol.Biol. (1990)

Release Date

1991-01-15

Peptides

ENDOTHIAPEPSIN: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

ENDOTHIAPEPSIN

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5lwr.1 | 5lws.1 | 5lwt.1 | 5lwu.1 | 5mb0.1 | 5mb3.1 | 5mb5.1 | 5mb6.1 | 5mb7.1 | 5og7.1 | 5oje.1 | 5oyq.1 | 5oyr.1 | 5oys.1 | 5oyt.1 | 5oyu.1 | 5oyv.1 | 5oyw.1 | 5oyx.1 | 5oyy.1 | 5oyz.1 | 5oz0.1 | 5oz1.1 | 5oz2.1 | 5oz3.1 | 5oz4.1 | 5oz5.1 | 5oz6.1 | 5oz7.1 | 5oz8.1 | 5oz9.1 | 5oza.1 | 5ozb.1 | 5ozc.1 | 5ozd.1 | 5oze.1 | 5ozf.1 | 5ozg.1 | 5ozh.1 | 5ozi.1 | 5ozj.1 | 5ozk.1 | 5ozl.1 | 5ozm.1 | 5ozn.1 | 5ozo.1 | 5ozp.1 | 5ozq.1 | 5ozr.1 | 5ozs.1 | 5ozt.1 | 5ozu.1 | 5ozv.1 | 5ozw.1 | 5ozx.1 | 5ozy.1 | 5ozz.1 | 5p00.1 | 5p01.1 | 5p02.1 | 5p03.1 | 5p04.1 | 5p05.1 | 5p06.1 | 5p07.1 | 5p08.1 | 5p09.1 | 5p0a.1 | 5p0b.1 | 5p0c.1 | 5p0d.1 | 5p0e.1 | 5p0f.1 | 5p0g.1 | 5p0h.1 | 5p0i.1 | 5p0j.1 | 5p0k.1 | 5p0l.1 | 5p0m.1 | 5p0n.1 | 5p0o.1 | 5p0p.1 | 5p0q.1 | 5p0r.1 | 5p0s.1 | 5p0t.1 | 5p0u.1 | 5p0v.1 | 5p0w.1 | 5p0x.1 | 5p0y.1 | 5p0z.1 | 5p10.1 | 5p11.1 | 5p12.1 | 5p13.1 | 5p14.1 | 5p15.1 | 5p16.1 | 5p17.1 | 5p18.1 | 5p19.1 | 5p1a.1 | 5p1b.1 | 5p1c.1 | 5p1d.1 | 5p1e.1 | 5p1f.1 | 5p1g.1 | 5p1h.1 | 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