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SMTL ID : 2er7.1

X-RAY ANALYSES OF ASPARTIC PROTEINASES.III. THREE-DIMENSIONAL STRUCTURE OF ENDOTHIAPEPSIN COMPLEXED WITH A TRANSITION-STATE ISOSTERE INHIBITOR OF RENIN AT 1.6 ANGSTROMS RESOLUTION

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x BOC- HIS- PRO- PHE- HIS- LOV- ILE- HIS: TRANSITION-STATE ISOSTERE INHIBITOR OF RENIN(Non-covalent)

BOC-HIS-PRO-PHE-HIS-LOV-ILE-HIS.1:

30 residues within 4Å:

Chain A: I.10, L.13, D.15, A.16, D.33, D.35, G.37, I.77, S.78, Y.79, G.80, D.81, S.83, D.119, I.122, L.125, L.133, T.135, I.217, D.219, G.221, T.222, T.223, F.280, G.281, P.282, I.283, F.291, I.300, I.304

28 PLIP interactions:

28 interactions with chain A

Hydrophobic interactions: A:I.10, A:L.13, A:D.15, A:A.16, A:I.77, A:Y.79, A:I.122, A:L.125, A:L.133, A:T.135, A:I.217, A:F.280, A:F.291
Hydrogen bonds: A:D.15, A:D.35, A:G.37, A:S.78, A:S.78, A:G.80, A:D.81, A:G.221, A:T.222, A:T.223, A:T.223, A:T.223
Water bridges: A:S.78, A:S.78, A:L.224

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.2:	3 residues within 4Å: Chain A: Y.179, S.182, I.183 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.179, A:G.181, A:I.183
SO4.3:	2 residues within 4Å: Chain A: S.113, S.114 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.114 Water bridges: A:S.115
SO4.4:	2 residues within 4Å: Chain A: S.137, P.138 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.137 Water bridges: A:T.74, A:S.137

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Veerapandian, B. et al., X-ray analyses of aspartic proteinases. III Three-dimensional structure of endothiapepsin complexed with a transition-state isostere inhibitor of renin at 1.6 A resolution. J.Mol.Biol. (1990)

Release Date

1991-01-15

Peptides

ENDOTHIAPEPSIN: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

ENDOTHIAPEPSIN

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