SMTL ID : 6rsv.1

Endothiapepsin in complex with 017

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.10 Å

Oligo State

monomer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: V.272, P.274, Y.277, A.312, S.329, K.330 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.329, A:K.330, A:K.330 Water bridges: A:V.272

1 x KHW: [(1~{R})-1-[1-(phenylmethyl)-1,2,3,4-tetrazol-5-yl]butyl]diazane(Non-covalent)

KHW.2: 14 residues within 4Å: Chain A: D.35, G.37, S.38, Y.79, D.81, F.194, I.217, D.219, G.221, T.222, Y.226, I.300, I.302, I.304 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:F.194, A:T.222, A:Y.226, A:I.300, A:I.304 Hydrogen bonds: A:D.35, A:G.37, A:D.81, A:T.222

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.3: 1 residues within 4Å: Chain A: Q.22 No protein-ligand interaction detected (PLIP)

1 x KHZ: 1~{H}-1,2,3,4-tetrazol-5-ylmethyldiazane(Non-covalent)

KHZ.4: 5 residues within 4Å: Chain A: V.248, F.280, P.282, I.283, F.291 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Magari, F. et al., Endothiapepsin in complex with 017. To Be Published

Release Date

2020-07-08

Peptides

Endothiapepsin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Endothiapepsin

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