SMTL ID : 4er1.1

THE ACTIVE SITE OF ASPARTIC PROTEINASES

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x 0ZP: N-[(1R,2R,4R)-1-(cyclohexylmethyl)-2-hydroxy-6-methyl-4-{[(2R)-2-methylbutyl]carbamoyl}heptyl]-3-(1H-imidazol-3-ium-4-yl)-N~2~-[3-naphthalen-1-yl-2-(naphthalen-1-ylmethyl)propanoyl]-L-alaninamide(Non-covalent)

0ZP.1: 28 residues within 4Å: Chain A: I.10, D.15, A.16, D.33, D.35, G.37, S.38, I.77, S.78, Y.79, G.80, D.81, S.115, F.116, D.119, L.125, L.133, F.194, I.217, D.219, G.221, T.222, T.223, L.224, Y.226, I.300, I.302, I.304 23 PLIP interactions: 23 interactions with chain A Hydrophobic interactions: A:I.10, A:D.15, A:A.16, A:I.77, A:Y.79, A:F.116, A:F.116, A:L.125, A:L.125, A:F.194, A:I.217, A:L.224, A:I.304 Hydrogen bonds: A:D.35, A:G.37, A:G.80, A:D.81, A:D.81, A:G.221, A:T.223, A:T.223, A:Y.226 Water bridges: A:L.224

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pearl, L. et al., The active site of aspartic proteinases. FEBS Lett. (1984)

Release Date

1991-01-15

Peptides

ENDOTHIAPEPSIN: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

ENDOTHIAPEPSIN

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