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SMTL ID : 3lzy.1

Crystal structure of Endothiapesin in complex with Xenon

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x XE: XENON(Non-covalent)

XE.1:

4 residues within 4Å:

Chain A: S.199, G.201, I.214, F.264

No protein-ligand interaction detected (PLIP)

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.2:	5 residues within 4Å: Chain A: A.187, S.189, E.196, W.197, T.198 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.196, A:E.196, A:T.198
GOL.3:	4 residues within 4Å: Chain A: D.15, T.223, L.224, F.280 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.15 Water bridges: A:Y.226
GOL.4:	6 residues within 4Å: Chain A: V.272, P.274, Y.277, A.312, S.329, K.330 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:V.272, A:K.330, A:K.330, A:K.330 Water bridges: A:V.272

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Behnen, J. et al., Old acquantance rediscover: use of xenon/protein complexes as a generic tool for SAD phasing of inhouse data. To be Published

Release Date

2011-05-25

Peptides

Endothiapepsin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Endothiapepsin

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Cartoon
Tube
Trace
Lines
Ball+Stick
Licorice
Hyperball
Rope
Surface
Spacefill
Outline
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Background

Transparent

Resolution

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