SMTL ID : 3u5l.1

Crystal Structure of the first bromodomain of human BRD4 in complex with a benzo-triazepine ligand (BzT-7)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.39 Å

Oligo State

monomer

Ligands

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 6 residues within 4Å: Chain A: I.59, I.60, K.61, T.62, N.94, I.97 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:I.59, A:K.61, A:T.62, A:T.62, A:N.94 Water bridges: A:T.62, A:T.62

1 x 08K: 8-chloro-1,4-dimethyl-6-phenyl-4H-[1,2,4]triazolo[4,3-a][1,3,4]benzotriazepine(Non-covalent)

08K.2: 9 residues within 4Å: Chain A: W.40, P.41, F.42, L.51, L.53, Y.98, N.99, I.105, M.108 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:W.40, A:P.41, A:P.41, A:F.42, A:L.51, A:L.51, A:I.105, A:I.105 Hydrogen bonds: A:N.99

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Filippakopoulos, P. et al., Benzodiazepines and benzotriazepines as protein interaction inhibitors targeting bromodomains of the BET family. Bioorg.Med.Chem. (2012)

Release Date

2011-11-23

Peptides

Bromodomain-containing protein 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain-containing protein 4

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