SMTL ID : 4hbv.1

Crystal Structure of the first bromodomain of human BRD4 in complex with a quinazolin ligand

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.63 Å

Oligo State

monomer

Ligands

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 5 residues within 4Å: Chain A: I.59, I.60, K.61, T.62, N.94 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:I.59, A:K.61, A:T.62, A:T.62, A:T.62, A:N.94 EDO.2: 3 residues within 4Å: Chain A: L.51, L.53 Ligands: 15E.3 1 PLIP interactions: 1 interactions with chain A Water bridges: A:N.52

1 x 15E: 6-bromo-3-methyl-3,4-dihydroquinazolin-2(1H)-one(Non-covalent)

15E.3: 9 residues within 4Å: Chain A: W.40, P.41, F.42, V.46, L.51, L.53, N.99, I.105 Ligands: EDO.2 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:P.41, A:L.51, A:L.53, A:I.105 Hydrogen bonds: A:N.99

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fish, P.V. et al., Identification of a Chemical Probe for Bromo and Extra C-Terminal Bromodomain Inhibition through Optimization of a Fragment-Derived Hit. J.Med.Chem. (2012)

Release Date

2012-10-31

Peptides

Bromodomain-containing protein 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain-containing protein 4

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