SMTL ID : 4nud.1

Crystal structure of the first bromodomain of human BRD4 in complex with MS436 inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.20 Å

Oligo State

monomer

Ligands

1 x NUD: 4-[(E)-(2-amino-4-hydroxy-5-methylphenyl)diazenyl]-N-(pyridin-2-yl)benzenesulfonamide(Non-covalent)

NUD.1: 8 residues within 4Å: Chain A: W.40, F.42, V.46, L.51, L.53, Y.56, N.99, I.105 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:W.40, A:F.42, A:V.46, A:L.51, A:L.51, A:I.105, A:I.105 Hydrogen bonds: A:N.99 Water bridges: A:N.99

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 6 residues within 4Å: Chain A: I.59, I.60, K.61, T.62, N.94, I.97 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:I.59, A:K.61, A:T.62, A:T.62

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, G. et al., Structure-Guided Design of Potent Diazobenzene Inhibitors for the BET Bromodomains. J.Med.Chem. (2013)

Release Date

2014-04-02

Peptides

Bromodomain-containing protein 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain-containing protein 4

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