SMTL ID : 4pce.1

Crystal Structure of the first bromodomain of human BRD4 in complex with compound B13

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.29 Å

Oligo State

monomer

Ligands

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 5 residues within 4Å: Chain A: I.59, I.60, K.61, T.62, N.94 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:I.59, A:K.61, A:T.62, A:T.62, A:N.94

1 x 2N0: 1-benzyl-2-ethyl-1,5,6,7-tetrahydro-4H-indol-4-one(Non-covalent)

2N0.2: 9 residues within 4Å: Chain A: W.40, P.41, V.46, L.51, L.53, Y.56, N.99, I.105, M.108 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:W.40, A:P.41, A:P.41, A:V.46, A:L.53, A:L.53, A:I.105, A:I.105 Hydrogen bonds: A:N.99

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhao, H. et al., Discovery of BRD4 bromodomain inhibitors by fragment-based high-throughput docking. Bioorg.Med.Chem.Lett. (2014)

Release Date

2014-05-07

Peptides

Bromodomain-containing protein 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain-containing protein 4

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