SMTL ID : 4pci.1

Crystal Structure of the first bromodomain of BRD4 in complex with B16

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.25 Å

Oligo State

monomer

Ligands

1 x 2NJ: (4S)-1-methyl-4-phenyl-1,3,4,5-tetrahydro-2H-1,5-benzodiazepin-2-one(Non-covalent)

2NJ.1: 9 residues within 4Å: Chain A: W.40, P.41, F.42, V.46, L.51, L.53, Y.56, N.99, I.105 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:W.40, A:P.41, A:L.51, A:L.53, A:L.53 Hydrogen bonds: A:N.99

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 5 residues within 4Å: Chain A: I.59, I.60, K.61, T.62, N.94 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:I.59, A:K.61, A:T.62, A:T.62, A:N.94

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhao, H. et al., Discovery of BRD4 bromodomain inhibitors by fragment-based high-throughput docking. Bioorg.Med.Chem.Lett. (2014)

Release Date

2014-05-14

Peptides

Bromodomain-containing protein 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain-containing protein 4

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